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BaseInfo

ncRNA ID novel_gma_miR1116
Species Glycine max
Class miRNA
Genome position Chr13:29695281-29695330 [-]
Reference genome Glycine_max_v2.0
Source SRR1451639
Length 24
Mature sequence(if miRNA) 27 - UUUUGGAAAACCGAUGUUAACAUC - 50
Stem-loop(if miRNA) -                     AU
 UUUUGGAAAACCGAUGUUAAC  C
 |||||||||||||||||||||  A
 AAAACUUUUUGGCUACAAUUG  U
A                     GU
Stem-loop sequence UUUUGGAAAACCGAUGUUAACAUCAUUGGUUAACAUCGGUUUUUCAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762243.1
ncRNA:24   CUACAAUUGUAGCCAAAAGGUUUU   1
  |**||||*||||*|||||||||||
targets:1432   GCAGUUAUCAUCCGUUUUCCAAAA   1455

2.5 PREDICTED: Glycine max uncharacterized LOC100798430 (LOC100798430), transcript variant X3, mRNA uncharacterized LOC100798430(LOC100798430) coding protein psRNATarget
XM_006583378.2
ncRNA:24   CUACAAUUGUAGCCAAAAGGUUUU   1
  |**||||*||||*|||||||||||
targets:1528   GCAGUUAUCAUCAGUUUUCCAAAA   1551

2.5 PREDICTED: Glycine max uncharacterized LOC100808317 (LOC100808317), mRNA uncharacterized LOC100808317(LOC100808317) coding protein psRNATarget
XM_006587425.2
ncRNA:24   CUACAAUUGUAGCCAAAAGGUUUU   1
  |**||||*||||*|||||||||||
targets:1429   GCAGUUAUCAUCCGUUUUCCAAAA   1452

2.5 PREDICTED: Glycine max uncharacterized LOC100798430 (LOC100798430), transcript variant X2, mRNA uncharacterized LOC100798430(LOC100798430) coding protein psRNATarget
XM_006587424.2
ncRNA:24   CUACAAUUGUAGCCAAAAGGUUUU   1
  |**||||*||||*|||||||||||
targets:1430   GCAGUUAUCAUCCGUUUUCCAAAA   1453

2.5 PREDICTED: Glycine max uncharacterized LOC100798430 (LOC100798430), transcript variant X1, mRNA uncharacterized LOC100798430(LOC100798430) coding protein psRNATarget