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BaseInfo

ncRNA ID novel_gma_miR1108
Species Glycine max
Class miRNA
Genome position Chr9:24559631-24559703 [-]
Reference genome Glycine_max_v2.0
Source SRR1451638;SRR1451644;SRR1451646;SRR1753107;SRR1451624
Length 24
Mature sequence(if miRNA) 50 - AGUUCCGGAAUGAGAAUGUUGGAU - 73
Stem-loop(if miRNA) ----A        AUG    U     --       A   U
     GUUCCGGA   AGAA GUUGG  AUUUCCG AAG A
     ||||||||   |||| |||||  ||||||| ||| C
     UAAGGCCU   UCUU CAAUC  UGAAGGC UUC U
CAUCG        ---    -     AU       C   U
Stem-loop sequence AGUUCCGGAAUGAGAAUGUUGGAUUUCCGAAAGUACUUCUUCCGGAAGUUACUAACUUCUUCCGGAAUGCUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001253233.2
ncRNA:24   UAGGUUGUAAGAGUAAGGCCUUGA   1
  =**||*|||||||||||*||||||
targets:228   GAACAUCAUUCUCAUUCAGGAACU   251

2.5 Glycine max N-carbamoylputrescine amidase-like (LOC100787298), mRNA N-carbamoylputrescine amidase-like(LOC100787298) coding protein psRNATarget