ncRNA ID | novel_gma_miR1103 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:37308971-37309108 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638;SRR1451644;SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACAUACAUGUAGGUUCGGAUGUA - 24 |
Stem-loop(if miRNA) |
--    UA                A  -A          A                C       G    A   CAUC  AACCUAUGUGUAUGUU GU  UAGAAAGUGU AGAUUUUUCAAUUUUU UACAUCG UUAU C   ||||  |||||||||||||||| ||  |||||||||| |||||||||||||||| ||||||| ||||   GUAG  UUGGAUGUACAUACAA CA  AUCUUUCACA UUUAAAAAGUUGAAAA AUGUAGU AAUA A AU    GC                -  AC          A                A       G    U |
Stem-loop sequence | CAUCUAAACCUAUGUGUAUGUUAGUAUAGAAAGUGUAAGAUUUUUCAAUUUUUCUACAUCGGUUAUACAUAUAAGUGAUGUAAAAAAGUUGAAAAAUUUAACACUUUCUACAACAACAUACAUGUAGGUUCGGAUGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT091521.1 |
|
2.5 | Soybean clone JCVI-FLGm-8O1 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003519250.3 |
|
2.5 | PREDICTED: Glycine max cytochrome b-c1 complex subunit 8 (LOC100500582), mRNA | cytochrome b-c1 complex subunit 8(LOC100500582) | coding protein | psRNATarget |