ncRNA ID | novel_gma_miR1100 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:50563778-50563968 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479 |
Length | 24 |
Mature sequence(if miRNA) | 168 - AAACUGUACUUUUGAUUGGAGAAC - 191 |
Stem-loop(if miRNA) |
--             U  G           ---------U      CG    UA     U   UC      UUA       U    C   -    ---     A   UCUCCAAUCGGAA UA AGUUUUACUUU          GUAAUC  UGUG  AUAAA GUU  UGCAUU   AGAAUUA GCAA UUA GCAA   GGUAU A   ||||||||||||| || |||||||||||          ||||||  ||||  ||||| |||  ||||||   ||||||| |||| ||| ||||   ||||| G   AGAGGUUAGUUUU AU UCAAAGUGAGG          CAUUAG  ACGC  UAUUU CAA  ACGUAA   UCUUAAU UGUU AGU CGUU   UCGUG A CA             C  G           UCCGGUGUGU      --    GC     C   --      -UG       U    U   A    UGU     C |
Stem-loop sequence | UCUCCAAUCGGAAUUAGAGUUUUACUUUUGUAAUCCGUGUGUAAUAAAUGUUUCUGCAUUUUAAGAAUUAUGCAACUUAGCAAGGUAUAAGACGUGCUUGUUUGCAUGAUUUGUUUAAUUCUGUAAUGCAAACCUUUAUCGCGCAGAUUACUGUGUGGCCUGGAGUGAAACUGUACUUUUGAUUGGAGAAC |