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BaseInfo

ncRNA ID novel_gma_miR1100
Species Glycine max
Class miRNA
Genome position Chr18:50563778-50563968 [+]
Reference genome Glycine_max_v2.0
Source SRR1294479
Length 24
Mature sequence(if miRNA) 168 - AAACUGUACUUUUGAUUGGAGAAC - 191
Stem-loop(if miRNA) --             U  G           ---------U      CG    UA     U   UC      UUA       U    C   -    ---     A
  UCUCCAAUCGGAA UA AGUUUUACUUU          GUAAUC  UGUG  AUAAA GUU  UGCAUU   AGAAUUA GCAA UUA GCAA   GGUAU A
  ||||||||||||| || |||||||||||          ||||||  ||||  ||||| |||  ||||||   ||||||| |||| ||| ||||   ||||| G
  AGAGGUUAGUUUU AU UCAAAGUGAGG          CAUUAG  ACGC  UAUUU CAA  ACGUAA   UCUUAAU UGUU AGU CGUU   UCGUG A
CA             C  G           UCCGGUGUGU      --    GC     C   --      -UG       U    U   A    UGU     C
Stem-loop sequence UCUCCAAUCGGAAUUAGAGUUUUACUUUUGUAAUCCGUGUGUAAUAAAUGUUUCUGCAUUUUAAGAAUUAUGCAACUUAGCAAGGUAUAAGACGUGCUUGUUUGCAUGAUUUGUUUAAUUCUGUAAUGCAAACCUUUAUCGCGCAGAUUACUGUGUGGCCUGGAGUGAAACUGUACUUUUGAUUGGAGAAC