ncRNA ID | novel_gma_miR1096 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:16734397-16734477 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUGGAUAGAGAAUUUUGAC - 20 |
Stem-loop(if miRNA) |
--  UG     A         CCG   AAAAU      UUAG   UU  GAUAG GAAUUUUGA   AAA     AAUUUA    A   ||  ||||| |||||||||   |||     ||||||   AG  UUGUU CUUAAAAUU   UUU     UUAAAU    U GU  GU     A         UAA   ---CU      UUAA |
Stem-loop sequence | UUUGGAUAGAGAAUUUUGACCGAAAAAAAUAAUUUAUUAGAUAAUUUAAAUUUCUUUAAUUUAAAAUUCAUUGUUUGGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KM587700.1 |
|
2.5 | Glycine max clone GmWRKY42 WRKY mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001317594.1 |
|
2.5 | Glycine max probable WRKY transcription factor 25 (LOC100127393), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003532786.3 |
|
3.0 | PREDICTED: Glycine max putative ETHYLENE INSENSITIVE 3-like 4 protein (LOC100789795), mRNA | putative ETHYLENE INSENSITIVE 3-like 4 protein(LOC100789795) | coding protein | psRNATarget |