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BaseInfo

ncRNA ID novel_gma_miR1095
Species Glycine max
Class miRNA
Genome position Chr5:8397466-8397643 [-]
Reference genome Glycine_max_v2.0
Source SRR1451638;SRR1451650;SRR1451652;SRR1451660;SRR1451611
Length 24
Mature sequence(if miRNA) 1 - UUUCAAAAAACCGAUGUUAACUGU - 24
Stem-loop(if miRNA) --                        AA           C                              -  A        UUUCAACA
  AGUUAACAUCGGUUUUUUGAAAAA  AUCGAUAUUAA UAACGUUAACAUCGAUUUUUUGUAAAAAAA UC AUGUUAAC        U
  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| || ||||||||        U
  UCAAUUGUAGCCAAAAAACUUUUU  UAGCUAUAAUU AUUGCAAUUGUAGCUAAAAGACAUUUUUUU AG UACAAUUG        A
UG                        --           A                              U  C        CUUACACA
Stem-loop sequence AGUUAACAUCGGUUUUUUGAAAAAAAAUCGAUAUUAACUAACGUUAACAUCGAUUUUUUGUAAAAAAAUCAAUGUUAACUUUCAACAUUAACACAUUCGUUAACAUCGAUUUUUUUUACAGAAAAUCGAUGUUAACGUUAAUUAAUAUCGAUUUUUUCAAAAAACCGAUGUUAACUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB171004.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:16   ACAUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:117   ACAUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:16   ACAUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:117   ACAUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:16   ACAUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:117   ACAUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget