| ncRNA ID | novel_gma_miR1094 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr5:34930145-34930291 [+] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1451638;SRR1451650;SRR1451653;SRR1451657;SRR1451660;SRR1451661;SRR1451663;SRR1451610;SRR1451615;SRR1451620;SRR1451621 |
| Length | 22 |
| Mature sequence(if miRNA) | 126 - UUGAGGACCAAAUUGAACCUUU - 147 |
| Stem-loop(if miRNA) |
-- UG A C G A AU ---- A AGGUU AUUU GUCCUCAAGUU UUAAAAAU AAUCAAUUUGG CCUCAA UCUUAAAAAU GAAUC A ||||| |||| ||||||||||| |||||||| ||||||||||| |||||| |||||||||| ||||| U UCCAA UAAA CAGGAGUUCAA AAUUUUUA UUAGUUAAACC GGAGUU AGAAUUUUUA CUUAG U UU GU C A A A CU AACU U |
| Stem-loop sequence | AGGUUUGAUUUAGUCCUCAAGUUCUUAAAAAUGAAUCAAUUUGGACCUCAAAUUCUUAAAAAUGAAUCAAUUUGAUUCUCAAAUUUUUAAGAUCUUGAGGACCAAAUUGAUUAAUUUUUAAAAACUUGAGGACCAAAUUGAACCUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003547028.3 |
|
1.0 | PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X2, mRNA | probable protein phosphatase 2C 62(LOC100815469) | coding protein | psRNATarget | |||||||||
| XM_014768080.1 |
|
1.0 | PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X1, mRNA | probable protein phosphatase 2C 62(LOC100815469) | coding protein | psRNATarget |