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BaseInfo

ncRNA ID	novel_gma_miR1090
Species	Glycine max
Class	miRNA
Genome position	Chr11:17245459-17245597 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451638;SRR1451652;SRR1451653;SRR1451660;SRR1451664;SRR1451606;SRR1451607;SRR1451617;SRR1451627
Length	22
Mature sequence(if miRNA)	118 - UUUGAGGACCAAAUUGAACCUU - 139
Stem-loop(if miRNA)	--    G     A                    A             CC      A   UA   ----  UA   GGUU AAUUU GUCUUUAAGUUUUUAAAAAU AAUCAAUUUGGUU  CAAAUU UUU  AAU    GG  C   |||| ||||| |||||||||||||||||||| |||||||||||||  |||||| |||  |||    ||   CCAA UUAAA CAGGAGUUUAAGAAUUUUUA UUAGUUAAAUUAG  GUUUAA AAA  UUG    CC  A UU    G     C                    C             -U      A   UC   AACU  UA
Stem-loop sequence	GGUUGAAUUUAGUCUUUAAGUUUUUAAAAAUAAAUCAAUUUGGUUCCCAAAUUAUUUUAAAUGGUACAAUCCUCAAGUUCUAAAAAAUUUGUGAUUAAAUUGAUUCAUUUUUAAGAAUUUGAGGACCAAAUUGAACCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547028.3	ncRNA:22   UUCCAAGUUAAACCAGGAGUUU   1   ==||*||||||||||||||||* targets:2619   GGGGAUCAAUUUGGUCCUCAAC   2640 Target Full Sequence	2.0	PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X2, mRNA	probable protein phosphatase 2C 62(LOC100815469)	coding protein	psRNATarget
XM_014768080.1	ncRNA:22   UUCCAAGUUAAACCAGGAGUUU   1   ==||*||||||||||||||||* targets:2631   GGGGAUCAAUUUGGUCCUCAAC   2652 Target Full Sequence	2.0	PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X1, mRNA	probable protein phosphatase 2C 62(LOC100815469)	coding protein	psRNATarget
XM_014773918.1	ncRNA:22   UUCCAAGUUAAACCAGGAGUUU   1   ***|||||*||||||||||||= targets:376   CUUGUUCAUUUUGGUCCUCAAG   397 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X2, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget
XM_014773919.1	ncRNA:22   UUCCAAGUUAAACCAGGAGUUU   1   ***|||||*||||||||||||= targets:1331   CUUGUUCAUUUUGGUCCUCAAG   1352 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X3, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget
XM_014773920.1	ncRNA:22   UUCCAAGUUAAACCAGGAGUUU   1   ***|||||*||||||||||||= targets:1331   CUUGUUCAUUUUGGUCCUCAAG   1352 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X4, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget
XM_014773917.1	ncRNA:22   UUCCAAGUUAAACCAGGAGUUU   1   ***|||||*||||||||||||= targets:1331   CUUGUUCAUUUUGGUCCUCAAG   1352 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100802202 (LOC100802202), transcript variant X1, mRNA	uncharacterized LOC100802202(LOC100802202)	coding protein	psRNATarget