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BaseInfo

ncRNA ID novel_gma_miR1088
Species Glycine max
Class miRNA
Genome position Chr3:25283234-25283314 [-]
Reference genome Glycine_max_v2.0
Source SRR1451638;SRR1451640;SRR1451644;SRR1451616;SRR1451622;SRR1451626
Length 21
Mature sequence(if miRNA) 1 - UAUAAAUAGGAUCGGAGGUAG - 21
Stem-loop(if miRNA) --   C                             G   A
  ACC CCGGUUCUAUUUAUAAGAAACAAGUUGUA UGU A
  ||| ||||||||||||||||||||||||||||| ||| A
  UGG GGCUAGGAUAAAUAUUCUUUGUUCAACAU ACG A
GA   A                             G   U
Stem-loop sequence ACCCCCGGUUCUAUUUAUAAGAAACAAGUUGUAGUGUAAAAUGCAGUACAACUUGUUUCUUAUAAAUAGGAUCGGAGGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519972.3
ncRNA:21   GAUGGAGGCUAGGAUAAAUAU   1
  **||=|||||||*||||||||
targets:671   ACACUUCCGAUCAUAUUUAUA   691

2.5 PREDICTED: Glycine max uncharacterized LOC100784696 (LOC100784696), mRNA uncharacterized LOC100784696(LOC100784696) coding protein psRNATarget