ncRNA ID | novel_gma_miR1087 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:10169147-10169213 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638;SRR1294484;SRR1294485;SRR1295531;SRR1451607;SRR1451617;SRR1451620;SRR1451624 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUAUUCCUACUUCCCCAUCAGG - 22 |
Stem-loop(if miRNA) |
--                       GC    - U   AUAUUCCUACUUCCCCAUCAGGU  UGAU C C   |||||||||||||||||||||||  |||| |   UAUAAGGAUGAAGGGGUGGUCCG  ACUA G U GA                       AU    U G |
Stem-loop sequence | AUAUUCCUACUUCCCCAUCAGGUGCUGAUCUCUGGUAUCAUAGCCUGGUGGGGAAGUAGGAAUAUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775525.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA | uncharacterized LOC106798717(LOC106798717) | coding protein | psRNATarget | |||||||||
XM_014762716.1 |
|
1.5 | PREDICTED: Glycine max pollen-specific protein SF21-like (LOC106794830), mRNA | pollen-specific protein SF21-like(LOC106794830) | coding protein | psRNATarget |