ncRNA ID | novel_gma_miR1080 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:42991639-42991856 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638;SRR1294480;SRR1294481;SRR2045372;SRR2045373;SRR2045374;SRR2045375;SRR1295518;SRR1295528;SRR1294475;SRR1451622 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUCCACUCUGCACACUGCACCUG - 24 |
Stem-loop(if miRNA) |
--A      CA                C      C            A        ---       G     -     CG  --U    CUCAUUAUU      A   UU     CU    GUGCAG  UGCAGAGUGGAUUUUG CAUCCU AUUGGCGAAAUA GUGGUGCU   GCUUUGU GAUUU UUUGG  GU   UUGA         AGAUAA UUA  UCUGA  C    ||||||  |||||||||||||||| |||||| |||||||||||| ||||||||   ||||||| ||||| |||||  ||   ||||         |||||| |||  |||||  A    CACGUC  ACGUCUCACCUAAAAC GUAGGA UAACCGCUUUAU CACCACGA   CGAAACA UUAAA AGAUU  CA   AACU         UUUAUU AAU  AGAUU  U GUC      AC                A      A            C        CAA       G     U     AU  CUC    ---------      A   --     AU |
Stem-loop sequence | AGUGCAGCAUGCAGAGUGGAUUUUGCCAUCCUCAUUGGCGAAAUAAGUGGUGCUGCUUUGUGGAUUUUUUGGCGGUUUUGACUCAUUAUUAGAUAAAUUAUUUCUGACUCAUUAUUAGAUAAAUUAUUUUCAACUCACUAUUAGAUAAAUUGACAAAGCAACAGCACCACCUAUUUCGCCAAUAAGGAUGACAAAAUCCACUCUGCACACUGCACCUG |