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BaseInfo

ncRNA ID novel_gma_miR1080
Species Glycine max
Class miRNA
Genome position Chr20:42991639-42991856 [-]
Reference genome Glycine_max_v2.0
Source SRR1451638;SRR1294480;SRR1294481;SRR2045372;SRR2045373;SRR2045374;SRR2045375;SRR1295518;SRR1295528;SRR1294475;SRR1451622
Length 24
Mature sequence(if miRNA) 1 - AAUCCACUCUGCACACUGCACCUG - 24
Stem-loop(if miRNA) --A      CA                C      C            A        ---       G     -     CG  --U    CUCAUUAUU      A   UU     CU
   GUGCAG  UGCAGAGUGGAUUUUG CAUCCU AUUGGCGAAAUA GUGGUGCU   GCUUUGU GAUUU UUUGG  GU   UUGA         AGAUAA UUA  UCUGA  C
   ||||||  |||||||||||||||| |||||| |||||||||||| ||||||||   ||||||| ||||| |||||  ||   ||||         |||||| |||  |||||  A
   CACGUC  ACGUCUCACCUAAAAC GUAGGA UAACCGCUUUAU CACCACGA   CGAAACA UUAAA AGAUU  CA   AACU         UUUAUU AAU  AGAUU  U
GUC      AC                A      A            C        CAA       G     U     AU  CUC    ---------      A   --     AU
Stem-loop sequence AGUGCAGCAUGCAGAGUGGAUUUUGCCAUCCUCAUUGGCGAAAUAAGUGGUGCUGCUUUGUGGAUUUUUUGGCGGUUUUGACUCAUUAUUAGAUAAAUUAUUUCUGACUCAUUAUUAGAUAAAUUAUUUUCAACUCACUAUUAGAUAAAUUGACAAAGCAACAGCACCACCUAUUUCGCCAAUAAGGAUGACAAAAUCCACUCUGCACACUGCACCUG