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BaseInfo

ncRNA ID novel_gma_miR1079
Species Glycine max
Class miRNA
Genome position Chr20:4162865-4162907 [+]
Reference genome Glycine_max_v2.0
Source SRR1451638
Length 19
Mature sequence(if miRNA) 1 - UGAAAACUGAUGUUGUAAG - 19
Stem-loop(if miRNA) --                AAG
  UGAAAACUGAUGUUGU   U
  ||||||||||||||||   A
  ACUUUUGGCUACAACA   C
AA                AUU
Stem-loop sequence UGAAAACUGAUGUUGUAAGUACUUAACAACAUCGGUUUUCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:19   GAAUGUUGUAGUCAAAAGU   1
  |||||||||||||||||||
targets:1627   CUUACAACAUCAGUUUUCA   1645

0.0 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget
XM_006593138.1
ncRNA:19   GAAUGUUGUAGUCAAAAGU   1
  *||||||||||||||||*|
targets:824   GUUACAACAUCAGUUUUAA   842

2.5 PREDICTED: Glycine max uncharacterized LOC102665828 (LOC102665828), mRNA uncharacterized LOC102665828(LOC102665828) coding protein psRNATarget