ncRNA ID | novel_gma_miR1069 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:4955941-4956036 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638 |
Length | 21 |
Mature sequence(if miRNA) | 76 - UGAAACUCUAAUUCUAACAGA - 96 |
Stem-loop(if miRNA) |
--A        C    A       AU           AACAAA     GC    GUUAGAGU AGAG UUCACCU  AUAAUUUAUGU      AAUUU  A    |||||||| |||| |||||||  |||||||||||      |||||    CAAUCUUA UCUC AAGUGGA  UAUUGAGUACA      UUAAG  U AGA        A    A       AU           ----AC     AU |
Stem-loop sequence | AGUUAGAGUCAGAGAUUCACCUAUAUAAUUUAUGUAACAAAAAUUUGCAUUAGAAUUCAACAUGAGUUAUUAAGGUGAAACUCUAAUUCUAACAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU019563.1 |
|
2.5 | Glycine max transcription factor (WRKY19) mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
AK245549.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-33-N21 | NA | coding protein | psRNATarget | |||||||||
XM_003538275.3 |
|
2.5 | PREDICTED: Glycine max probable WRKY transcription factor 25 (LOC100127421), mRNA | probable WRKY transcription factor 25(LOC100127421) | coding protein | psRNATarget | |||||||||
BT098633.1 |
|
2.5 | Soybean clone JCVI-FLGm-12D4 unknown mRNA | NA | coding protein | psRNATarget |