ncRNA ID | novel_gma_miR1062 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:8086835-8086932 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638;SRR1451639;SRR1451641;SRR1451619;SRR1451620 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CUUCCGGAUGAACAAUUUGUUC - 22 |
Stem-loop(if miRNA) |
--C                                           AGA    UUCCGGAUGAACAAUUUGUUCUACCGGAAGAAUCUUCUUCUGG   A    |||||||||||||||||||||||||||||||||||||||||||    AAGGCCUACUUGUUAAAUAAGAUGGCUUUCUUGGAAGAAGGCC   G AAU                                           AUC |
Stem-loop sequence | CUUCCGGAUGAACAAUUUGUUCUACCGGAAGAAUCUUCUUCUGGAGAAGCUACCGGAAGAAGGUUCUUUCGGUAGAAUAAAUUGUUCAUCCGGAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588641.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X1, mRNA | uncharacterized LOC102667717(LOC102667717) | coding protein | psRNATarget | |||||||||
XM_006588642.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X2, mRNA | uncharacterized LOC102667717(LOC102667717) | coding protein | psRNATarget |