ncRNA ID | novel_gma_miR1058 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:37660417-37660636 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638;SRR2045371;SRR1295517;SRR1295520;SRR1295521;SRR1294474;SRR1451618;SRR1294477 |
Length | 22 |
Mature sequence(if miRNA) | 199 - AGGACUAAAAGUAAAAAGCACU - 220 |
Stem-loop(if miRNA) |
--C       U      C          UU  UA          C                        C    A  A       -A G A        UG      GAAC    GCUUUUU GCUUUU GUCCUUGCAA  UU  UUUUUUGUUU UAGUCCUUGUAAAUUAUGUUUGUU UGUU UU GUCCUUA  A G CUUUAGAU  UGCUUU    A    ||||||| |||||| ||||||||||  ||  |||||||||| |||||||||||||||||||||||| |||| || |||||||  | | ||||||||  ||||||    G    CGAAAAA UGAAAA CAGGAACGUU  AA  AAAAAACAAA AUCAGGAACGUUUAAUAUAAACAA ACAA AA UAGGAAU  U C GAAAUCUA  GCGAAA    U UCA       -      U          UU  UA          A                        A    A  G       AC G -        UU      AAGG |
Stem-loop sequence | CGCUUUUUUGCUUUUCGUCCUUGCAAUUUUUAUUUUUUGUUUCUAGUCCUUGUAAAUUAUGUUUGUUCUGUUAUUAGUCCUUAAAGGACUUUAGAUUGUGCUUUGAACAGUGGAAAAAGCGUUAUCUAAAGCGUCAUAAGGAUGAAAAACAAAACAAAUAUAAUUUGCAAGGACUAAAAACAAAAAAAUAAUUUUGCAAGGACUAAAAGUAAAAAGCACU |