ncRNA ID | novel_gma_miR1052 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:19547489-19547679 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638;SRR1451652;SRR1451657;SRR1451658;SRR1451660;SRR1451663;SRR3160568;SRR1295519;SRR1295521;SRR1295525;SRR1295526;SRR1295527;SRR1451608;SRR1292929;SRR1451618;SRR1294476;SRR1451620;SRR1451621;SRR1292924 |
Length | 24 |
Mature sequence(if miRNA) | 168 - GAGAAACAUUAAGGCGUUGGACCU - 191 |
Stem-loop(if miRNA) |
--    AA        C   G   -        -A      GA    UG   --       AA        CA  G   -        -A       A   U   GAGA  CAUUAAGG GUU GAC CUUUAACG  UCUCUU  UUUU  GGA  GGAGAGA  CGUUAAGG  UU GAC CUUUAACG  UCUCUCC UUU U   ||||  |||||||| ||| ||| ||||||||  ||||||  ||||  |||  |||||||  ||||||||  || ||| ||||||||  ||||||| |||   CUCU  GUAAUUUC CAG UUG GGAAUUGC  AGGGAG  GAGG  UUU  CCUCUCU  GCAAUUUC  AG UUG GGAAUUGU  AGGGAGG AGG U CU    -A        -   G   C        AA      --    GU   UA       -A        -C  G   C        AA       -   G |
Stem-loop sequence | GAGAAACAUUAAGGCGUUGGACCUUUAACGAUCUCUUGAUUUUUGGGAGGAGAGAAACGUUAAGGCAUUGGACCUUUAACGAUCUCUCCAUUUUUUGGGAGGAGGGAAAUGUUAAGGCGUUGGACCUUUAACGAUCUCUCCAUUUUUGGGAGGAGGGAAACGUUAAGGCGUUGGACCUUUAAUGAUCUCUC |