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BaseInfo

ncRNA ID	bra-miR156d-3p
Species	Brassica rapa
Class	miRNA
Genome position	chrA6:17880586-17880682 [+]
Reference genome	Brapa_1.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	75 - GCUCACUCUCUAUCUGUCACC - 95
Stem-loop(if miRNA)	-U         -                    GGCU   UU    AUU  A   GGUGACAGA AGAGAGUGAGCACACAUGGU    UUC  GCAU   GG A   ||||||||| ||||||||||||||||||||    |||  ||||   || G   CCACUGUCU UCUCUCACUCGUGUGUAUCG    AAG  CGUA   UC A CC         A                    ----   UU    --C  U
Stem-loop sequence	UGGUGACAGAAGAGAGUGAGCACACAUGGUGGCUUUCUUGCAUAUUGGAAGAUCUCAUGCUUGAAGCUAUGUGUGCUCACUCUCUAUCUGUCACCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009147669.2	ncRNA:21   CCACUGUCUAUCUCUCACUCG   1   **|*||||||||||||*|||| targets:31   AUUUACAGAUAGAGAGAGAGC   51 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC103869591 (LOC103869591), mRNA	uncharacterized LOC103869591(LOC103869591)	coding protein	psRNATarget

Reference

1	PMID:24559317 "Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014).