ncRNA ID | novel_gma_miR1044 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:41599861-41600025 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451638 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGUCUAUUACUCUGAAAUUUC - 21 |
Stem-loop(if miRNA) |
--  U      C          C  -A   GAUAAUACCUUACCUAAAAUAUGAUACUCAAAUAAAAAUGUACAACUAUUAAG   UG CUAUUA UCUGAAAUUU UA  AGU                                                     U   || |||||| |||||||||| ||  |||   AC GAUAAU AGACUUUAAA AU  UAU                                                     U AG  U      A          A  AA   UGUUAUAAUUCAUCACUGUUUUAGUUUGGUUCAGAGUAAAAAAAUAUUACUAA |
Stem-loop sequence | UGUCUAUUACUCUGAAAUUUCUAAAGUGAUAAUACCUUACCUAAAAUAUGAUACUCAAAUAAAAAUGUACAACUAUUAAGUUAAUCAUUAUAAAAAAAUGAGACUUGGUUUGAUUUUGUCACUACUUAAUAUUGUUAUAAUAAAAAUUUCAGAAUAAUAGUCAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766116.1 |
|
3.0 | PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g51880 (LOC106794186), mRNA | probable LRR receptor-like serine/threonine-protein kinase At1g51880(LOC106794186) | coding protein | psRNATarget | |||||||||
XM_006578671.2 |
|
3.0 | PREDICTED: Glycine max U5 small nuclear ribonucleoprotein 40 kDa protein-like (LOC102662882), mRNA | U5 small nuclear ribonucleoprotein 40 kDa protein-like(LOC102662882) | coding protein | psRNATarget |