ncRNA ID | novel_gma_miR1041 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:34435515-34435602 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451637;SRR1451638;SRR1451641;SRR1451646;SRR1451654;SRR1451660;SRR3160569;SRR1451625 |
Length | 21 |
Mature sequence(if miRNA) | 68 - CAAACAUGAGAAAUAGCGGCC - 88 |
Stem-loop(if miRNA) |
---CU        AG     AUUU    GAAC        -A    UA      UUGUUUUU  GUGUU    GACG    CGGGGAAC  GGAA  A      ||||||||  |||||    ||||    ||||||||  ||||      GAUAAAGA  UACAA    CUGC    GUUUCUUG  UUUU  U CCGGC        -G     --AC    ---A        GG    UU |
Stem-loop sequence | CUUUGUUUUUAGGUGUUAUUUGACGGAACCGGGGAACAGGAAUAAUUUUUUUGGGUUCUUUGACGUCCAAACAUGAGAAAUAGCGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT095187.1 |
|
3.0 | Soybean clone JCVI-FLGm-6N2 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT093834.1 |
|
3.0 | Soybean clone JCVI-FLGm-24O10 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
AK287363.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-51-H23 | NA | coding protein | psRNATarget | |||||||||
XM_003551889.3 |
|
3.0 | PREDICTED: Glycine max spermidine hydroxycinnamoyl transferase-like (LOC100778626), mRNA | spermidine hydroxycinnamoyl transferase-like(LOC100778626) | coding protein | psRNATarget |