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BaseInfo

ncRNA ID	novel_gma_miR1039
Species	Glycine max
Class	miRNA
Genome position	Chr12:37311029-37311142 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451637;SRR1451615
Length	21
Mature sequence(if miRNA)	1 - UAUCACAAUGUCAUCAUCUUG - 21
Stem-loop(if miRNA)	--             A           A      AA  G  C  C        AUCAA   AGAUGGUGACAUU UGAUGGUUAUG AUGUAA  AU AC UU UAUAUUGG     G   ||||||||||||| ||||||||||| ||||||  || || || ||||||||   UCUACUACUGUAA ACUAUCAAUAC UACAUU  UA UG AA AUGUAACC     U GU             C           C      --  G  A  A        AACAU
Stem-loop sequence	AGAUGGUGACAUUAUGAUGGUUAUGAAUGUAAAAAUGACCUUCUAUAUUGGAUCAAGUUACAACCAAUGUAAAAAGUGAUUUACAUCCAUAACUAUCACAAUGUCAUCAUCUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006582177.2	ncRNA:21   GUUCUACUACUGUAACACUAU   1   |**|||||||||||||||=|| targets:1311   CUUGAUGAUGACAUUGUGGUA   1331 Target Full Sequence	2.5	PREDICTED: Glycine max probable galacturonosyltransferase 12 (LOC100777811), mRNA	probable galacturonosyltransferase 12(LOC100777811)	coding protein	psRNATarget
XM_003543242.3	ncRNA:21   GUUCUACUACUGUAACACUAU   1   |**|||||||||||||||=|| targets:1491   CUCGAUGAUGACAUUGUGGUA   1511 Target Full Sequence	2.5	PREDICTED: Glycine max probable galacturonosyltransferase 12 (LOC100802623), mRNA	probable galacturonosyltransferase 12(LOC100802623)	coding protein	psRNATarget
XM_003523367.3	ncRNA:21   GUUCUACUACUGUAACACUAU   1   |=|*|||||||||||||||*| targets:963   CGACAUGAUGACAUUGUGAAA   983 Target Full Sequence	2.5	PREDICTED: Glycine max TOM1-like protein 2 (LOC100792343), mRNA	TOM1-like protein 2(LOC100792343)	coding protein	psRNATarget
XM_003526613.3	ncRNA:21   GUUCUACUACUGUAACACUAU   1   |=|*|||||||||||||||*| targets:1097   CGACAUGAUGACAUUGUGAAA   1117 Target Full Sequence	2.5	PREDICTED: Glycine max TOM1-like protein 2 (LOC100795713), mRNA	TOM1-like protein 2(LOC100795713)	coding protein	psRNATarget
XM_014768199.1	ncRNA:21   GUUCUACUACUGUAACACUAU   1   *||||||*|||||||||||*| targets:1159   AAAGAUGUUGACAUUGUGAAA   1179 Target Full Sequence	2.5	PREDICTED: Glycine max putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 (LOC100775357), transcript variant X2, mRNA	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440(LOC100775357)	coding protein	psRNATarget
XM_003547109.3	ncRNA:21   GUUCUACUACUGUAACACUAU   1   *||||||*|||||||||||*| targets:1157   AAAGAUGUUGACAUUGUGAAA   1177 Target Full Sequence	2.5	PREDICTED: Glycine max putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 (LOC100775357), transcript variant X1, mRNA	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440(LOC100775357)	coding protein	psRNATarget