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BaseInfo

ncRNA ID	novel_gma_miR1032
Species	Glycine max
Class	miRNA
Genome position	Chr8:43515468-43515625 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451637
Length	20
Mature sequence(if miRNA)	139 - AAGGAAAAAUGAAAUAAGCU - 158
Stem-loop(if miRNA)	--         -U     A  C                        A  C    A    AAAUUAUC   -      --A   AA   AAGGAAAAA  GAAAU AG UUCUCUAUAAGCUAAAAUUAGCUU UG AUGA UUAA        UUU UAGAGA   UCU  U   |||||||||  ||||| || |||||||||||||||||||||||| || |||| ||||        ||| ||||||   |||   UUCCUUUUU  CUUUA UC AAGAGGUAUUCGAUUUUAAUCGGA AC UAUU GAUU        AAA AUCUUU   AGA  A UC         UU     C  A                        C  A    C    --------   C      GCG   GU
Stem-loop sequence	AAGGAAAAAUGAAAUAAGCUUCUCUAUAAGCUAAAAUUAGCUUAUGCAUGAAUUAAAAAUUAUCUUUUAGAGAAUCUAAUAUGAGAGCGUUUCUACAAAUUAGCUUAUACACAGGCUAAUUUUAGCUUAUGGAGAAACUCAUUUCUUUUUUUCCUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014771056.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |||||||||||||||||||| targets:409   AGCUUAUUUCAUUUUUCCUU   428 Target Full Sequence	0.0	PREDICTED: Glycine max F-box only protein 6-like (LOC100810179), transcript variant X3, mRNA	F-box only protein 6-like(LOC100810179)	coding protein	psRNATarget
XM_014772869.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   *||||||||||||||||=|| targets:13   UGCUUAUUUCAUUUUUCUUU   32 Target Full Sequence	1.5	PREDICTED: Glycine max GATA transcription factor 8-like (LOC100816641), transcript variant X4, mRNA	GATA transcription factor 8-like(LOC100816641)	coding protein	psRNATarget
XM_003543458.3	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |*=||||||||||||||||| targets:1679   AUUUUAUUUCAUUUUUCCUU   1698 Target Full Sequence	2.0	PREDICTED: Glycine max THO complex subunit 4A-like (LOC100783362), mRNA	THO complex subunit 4A-like(LOC100783362)	coding protein	psRNATarget
XM_003538169.3	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   ||=||*|||||||||||||| targets:1028   AGUUUCUUUCAUUUUUCCUU   1047 Target Full Sequence	2.0	PREDICTED: Glycine max fasciclin-like arabinogalactan protein 11 (LOC100795316), mRNA	fasciclin-like arabinogalactan protein 11(LOC100795316)	coding protein	psRNATarget
XM_014776169.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |||||**||||||||||||| targets:593   AGCUUCCUUCAUUUUUCCUU   612 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100803499 (LOC100803499), transcript variant X1, mRNA	uncharacterized LOC100803499(LOC100803499)	coding protein	psRNATarget
XM_006580963.2	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |||||**||||||||||||| targets:590   AGCUUCCUUCAUUUUUCCUU   609 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100803499 (LOC100803499), transcript variant X2, mRNA	uncharacterized LOC100803499(LOC100803499)	coding protein	psRNATarget
BT093480.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |||||**||||||||||||| targets:655   AGCUUCCUUCAUUUUUCCUU   674 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-17I8 unknown mRNA	NA	coding protein	psRNATarget
NM_001254239.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |||||**||||||||||||| targets:655   AGCUUCCUUCAUUUUUCCUU   674 Target Full Sequence	2.0	Glycine max uncharacterized LOC100803499 (LOC100803499), mRNA	uncharacterized LOC100803499(LOC100803499)	coding protein	psRNATarget
XM_014762149.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **|||*|||||||||||||| targets:271   UUCUUCUUUCAUUUUUCCUU   290 Target Full Sequence	2.0	PREDICTED: Glycine max F-box/FBD/LRR-repeat protein At1g78750-like (LOC102665233), transcript variant X1, mRNA	F-box/FBD/LRR-repeat protein At1g78750-like(LOC102665233)	coding protein	psRNATarget
XM_014762154.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **|||*|||||||||||||| targets:271   UUCUUCUUUCAUUUUUCCUU   290 Target Full Sequence	2.0	PREDICTED: Glycine max F-box/FBD/LRR-repeat protein At1g78750-like (LOC102665233), transcript variant X6, mRNA	F-box/FBD/LRR-repeat protein At1g78750-like(LOC102665233)	coding protein	psRNATarget
XM_014762151.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **|||*|||||||||||||| targets:271   UUCUUCUUUCAUUUUUCCUU   290 Target Full Sequence	2.0	PREDICTED: Glycine max F-box/FBD/LRR-repeat protein At1g78750-like (LOC102665233), transcript variant X3, mRNA	F-box/FBD/LRR-repeat protein At1g78750-like(LOC102665233)	coding protein	psRNATarget
XM_014762152.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **|||*|||||||||||||| targets:271   UUCUUCUUUCAUUUUUCCUU   290 Target Full Sequence	2.0	PREDICTED: Glycine max F-box/FBD/LRR-repeat protein At1g78750-like (LOC102665233), transcript variant X4, mRNA	F-box/FBD/LRR-repeat protein At1g78750-like(LOC102665233)	coding protein	psRNATarget
XM_014762153.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **|||*|||||||||||||| targets:271   UUCUUCUUUCAUUUUUCCUU   290 Target Full Sequence	2.0	PREDICTED: Glycine max F-box/FBD/LRR-repeat protein At1g78750-like (LOC102665233), transcript variant X5, mRNA	F-box/FBD/LRR-repeat protein At1g78750-like(LOC102665233)	coding protein	psRNATarget
XM_006587275.2	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **|||*|||||||||||||| targets:246   UUCUUCUUUCAUUUUUCCUU   265 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC102666618 (LOC102666618), transcript variant X1, mRNA	uncharacterized LOC102666618(LOC102666618)	coding protein	psRNATarget
XM_006587276.2	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **|||*|||||||||||||| targets:246   UUCUUCUUUCAUUUUUCCUU   265 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC102666618 (LOC102666618), transcript variant X2, mRNA	uncharacterized LOC102666618(LOC102666618)	coding protein	psRNATarget
XM_003521132.3	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |*|||||||||||||||=|| targets:1233   AACUUAUUUCAUUUUUCUUU   1252 Target Full Sequence	2.5	PREDICTED: Glycine max (+)-neomenthol dehydrogenase-like (LOC100806995), mRNA	(+)-neomenthol dehydrogenase-like(LOC100806995)	coding protein	psRNATarget
XM_003531140.3	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **||||||||*||||||||| targets:116   CUCUUAUUUCUUUUUUCCUU   135 Target Full Sequence	2.5	PREDICTED: Glycine max F-box/kelch-repeat protein At1g67480-like (LOC100815474), transcript variant X1, mRNA	F-box/kelch-repeat protein At1g67480-like(LOC100815474)	coding protein	psRNATarget
XM_014778853.1	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **||||||||*||||||||| targets:77   CUCUUAUUUCUUUUUUCCUU   96 Target Full Sequence	2.5	PREDICTED: Glycine max F-box/kelch-repeat protein At1g67480-like (LOC100815474), transcript variant X2, mRNA	F-box/kelch-repeat protein At1g67480-like(LOC100815474)	coding protein	psRNATarget
XM_006585050.2	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   **||||||||*||||||||| targets:116   CUCUUAUUUCUUUUUUCCUU   135 Target Full Sequence	2.5	PREDICTED: Glycine max F-box/kelch-repeat protein At1g67480-like (LOC100815474), transcript variant X3, mRNA	F-box/kelch-repeat protein At1g67480-like(LOC100815474)	coding protein	psRNATarget
XM_003527223.3	ncRNA:20   UCGAAUAAAGUA-AAAAGGAA   1   *|||||||||||-|||||||| targets:1184   UGCUUAUUUCAUCUUUUCCUU   1204 Target Full Sequence	3.0	PREDICTED: Glycine max xylem cysteine proteinase 2-like (LOC100810431), transcript variant X2, mRNA	xylem cysteine proteinase 2-like(LOC100810431)	coding protein	psRNATarget
XM_003527221.3	ncRNA:20   UCGAAUAAAGUA-AAAAGGAA   1   *|||||||||||-|||||||| targets:1177   UGCUUAUUUCAUCUUUUCCUU   1197 Target Full Sequence	3.0	PREDICTED: Glycine max xylem cysteine proteinase 2-like (LOC100809366), mRNA	xylem cysteine proteinase 2-like(LOC100809366)	coding protein	psRNATarget
XM_006580118.2	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |*=|||*||||||||||||| targets:2325   ACUUUAAUUCAUUUUUCCUU   2344 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100813988 (LOC100813988), transcript variant X2, mRNA	uncharacterized LOC100813988(LOC100813988)	coding protein	psRNATarget
XM_003524165.3	ncRNA:20   UCGAAUAAAGUAAAAAGGAA   1   |*=|||*||||||||||||| targets:1801   ACUUUAAUUCAUUUUUCCUU   1820 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100813988 (LOC100813988), transcript variant X1, mRNA	uncharacterized LOC100813988(LOC100813988)	coding protein	psRNATarget