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BaseInfo

ncRNA ID novel_gma_miR1031
Species Glycine max
Class miRNA
Genome position Chr12:32708640-32708733 [+]
Reference genome Glycine_max_v2.0
Source SRR1451637;SRR1451649;SRR1451605
Length 24
Mature sequence(if miRNA) 71 - AAUUAGAACAUGACACGUGACAGU - 94
Stem-loop(if miRNA) --                        -  --AAU  UAACAAUAAUGU
  UGUCACGUGUCAUGUUCUGAUUGA UC     GA            A
  |||||||||||||||||||||||| ||     ||            U
  ACAGUGCACAGUACAAGAUUAACU AG     AG            U
UG                        U  AACUU  GUACCUUCUAUU
Stem-loop sequence UGUCACGUGUCAUGUUCUGAUUGAUCAAUGAUAACAAUAAUGUAUUUUAUCUUCCAUGGAUUCAAGAUUCAAUUAGAACAUGACACGUGACAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170905.1
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  ||||||||||||||||||||||||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

0.0 Sequence 8569 from Patent EP2559767 NA coding protein psRNATarget
LQ242574.1
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  ||||||||||||||||||||||||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

0.0 Sequence 8569 from Patent EP2985353 NA coding protein psRNATarget
HI410444.1
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  ||||||||||||||||||||||||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

0.0 Sequence 8569 from Patent EP2074227 NA coding protein psRNATarget
LQ242575.1
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  ||||||||||||||||||||||||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

0.0 Sequence 8570 from Patent EP2985353 NA coding protein psRNATarget
HI410445.1
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  ||||||||||||||||||||||||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

0.0 Sequence 8570 from Patent EP2074227 NA coding protein psRNATarget
JB170906.1
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  ||||||||||||||||||||||||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

0.0 Sequence 8570 from Patent EP2559767 NA coding protein psRNATarget
AK245140.1
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  |||||||||||||||*||||||||
targets:1508   ACUGUCACGUGUCAUAUUCUAAUU   1531

1.5 Glycine max cDNA, clone: GMFL01-21-P01 NA coding protein psRNATarget
XM_006602607.2
ncRNA:24   UGACAGUGCACAGUACAAGAUUAA   1
  |=|||||||||||||*||||||||
targets:566   AUUGUCACGUGUCAUAUUCUAAUU   589

1.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget