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BaseInfo

ncRNA ID	bra-miR156b-3p
Species	Brassica rapa
Class	miRNA
Genome position	chrA6:17880337-17880458 [+]
Reference genome	Brapa_1.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	92 - GCUCACUCUCUAUCUGUCACC - 112
Stem-loop(if miRNA)	GAGUGCU     AUU A          -                    GGCU   UU    -  UUG        GAGGA   G UGGUGACAGA AGAGAGUGAGCACACAUGGU    UUC  GCAU AU   A        |||||   | |||||||||| ||||||||||||||||||||    |||  |||| ||        CUCUU   C GCCACUGUCU UCUCUCACUCGUGUGUAUCG    AAG  CGUA UG   A -----CU     --C -          A                    ----   UU    C  UAG
Stem-loop sequence	GAGUGCUGAGGAAUUGAUGGUGACAGAAGAGAGUGAGCACACAUGGUGGCUUUCUUGCAUAUUUGAAGAUGUCAUGCUUGAAGCUAUGUGUGCUCACUCUCUAUCUGUCACCGCCUUCUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009147669.2	ncRNA:21   CCACUGUCUAUCUCUCACUCG   1   **|*||||||||||||*|||| targets:31   AUUUACAGAUAGAGAGAGAGC   51 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC103869591 (LOC103869591), mRNA	uncharacterized LOC103869591(LOC103869591)	coding protein	psRNATarget

Reference

1	PMID:24559317 "Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014).