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BaseInfo

ncRNA ID novel_gma_miR1021
Species Glycine max
Class miRNA
Genome position Chr4:11191606-11191659 [+]
Reference genome Glycine_max_v2.0
Source SRR1451637
Length 24
Mature sequence(if miRNA) 31 - UUCUAAGACGGUUUUUCAGAGAAC - 54
Stem-loop(if miRNA) --    CAC                 U
  UUUC   AAAAUCGUCUUAGAAAG C
  ||||   |||||||||||||||||
  AGAG   UUUUGGCAGAAUCUUUU U
CA    ACU                 A
Stem-loop sequence UUUCCACAAAAUCGUCUUAGAAAGUCUAUUUUCUAAGACGGUUUUUCAGAGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CAAGAGACUUUUUGGCAGAAUCUU   1
  |||||=||||||||||||||||||
targets:2526   GUUCUUUGAAAAACCGUCUUAGAA   2549

1.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014775518.1
ncRNA:24   CAAGAGACUUUUUGGCAGAAUCUU   1
  |*|=*=||||*|||||||||||||
targets:733   GAUUAUUGAAUAACCGUCUUAGAA   756

2.0 PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA methylsterol monooxygenase 1-1-like(LOC100802435) coding protein psRNATarget
XM_006577404.1
ncRNA:24   CAAGAGACUUUUUGGCAGAAUCUU   1
  ***=||||||==||||||||||||
targets:77   CGGUUCUGAAGGACCGUCUUAGAA   100

2.5 PREDICTED: Glycine max uncharacterized LOC102670046 (LOC102670046), mRNA uncharacterized LOC102670046(LOC102670046) coding protein psRNATarget