ncRNA ID | novel_gma_miR1020 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:15663730-15663881 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479;SRR1451604 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGGCAGUAGAAUGGAGAAGGAG - 24 |
Stem-loop(if miRNA) |
--      G     C                          G     C                    G      A   CCUUCU CAUUC ACUGUCAUUGAUCUUCAAGAAGCAAA GACUC AUUGAUGAAGAAGAUCCAAG CCUACA G   |||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||   GGAAGA GUAAG UGACGGUAACUAGAAGUUCUUCGUUU CUGAG UAACUACUUCUUCUAGGUUC GGAUGU C GA      G     A                          A     A                    G      U |
Stem-loop sequence | CCUUCUGCAUUCCACUGUCAUUGAUCUUCAAGAAGCAAAGGACUCCAUUGAUGAAGAAGAUCCAAGGCCUACAAGCUUGUAGGGCUUGGAUCUUCUUCAUCAAUAGAGUCAUUUGCUUCUUGAAGAUCAAUGGCAGUAGAAUGGAGAAGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767757.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC106796179 (LOC106796179), mRNA | uncharacterized LOC106796179(LOC106796179) | coding protein | psRNATarget |