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BaseInfo

ncRNA ID novel_gma_miR1002
Species Glycine max
Class miRNA
Genome position Chr17:5926147-5926248 [+]
Reference genome Glycine_max_v2.0
Source SRR1451637;SRR1451624
Length 21
Mature sequence(if miRNA) 1 - UGUUUGACAGAGAUGUAUGGA - 21
Stem-loop(if miRNA) --U     A    -                  A     AU  UAUU UC    
   GUUUG CAGA GAUGUAUGGAGUGAGAGA GGGAA  GA    U  CGAUC
   ||||| |||| |||||||||||||||||| |||||  ||    |  ||||C
   CAAGC GUCU CUACAUACCUUACUCUCU CCCUU  CU    A  GCUAC
AUC     A    G                  -     CU  ---C UU    
Stem-loop sequence UGUUUGACAGAGAUGUAUGGAGUGAGAGAAGGGAAAUGAUAUUUUCCGAUCCCAUCGUUACUCUCUUCCCUCUCUCAUUCCAUACAUCGUCUGACGAACCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242719.1
ncRNA:21   AGGUAUGUAGAGACAGUUUGU   1
  |||||||||||||||||||||
targets:84   UCCAUACAUCUCUGUCAAACA   104

0.0 Sequence 8714 from Patent EP2985353 NA coding protein psRNATarget
HI410589.1
ncRNA:21   AGGUAUGUAGAGACAGUUUGU   1
  |||||||||||||||||||||
targets:84   UCCAUACAUCUCUGUCAAACA   104

0.0 Sequence 8714 from Patent EP2074227 NA coding protein psRNATarget
JB171050.1
ncRNA:21   AGGUAUGUAGAGACAGUUUGU   1
  |||||||||||||||||||||
targets:84   UCCAUACAUCUCUGUCAAACA   104

0.0 Sequence 8714 from Patent EP2559767 NA coding protein psRNATarget