ncRNA ID |
osa_circ_036887 |
Species |
Oryza sativa |
Class |
circRNA |
Genome position |
8:17730586-17731653[-/+] |
Reference genome |
RGAPv7 |
Source |
PlantcircBase
|
Method |
SMALT and Segemehl/find_circ/NA |
Type |
exonic |
Splice junction sequence |
CGGAGGAGGGCAAGAGAAGATGGTGGTGATGATGATGCAGAAGAGCTCCCTGGACCTGGTGCTTGTGCCATGTGGTCTGGTGATCATGTTCGGCTACCACCTTCGCGACAACGCTGCTGATGTGGATCTTCGGGCCAATACCAATGTTCACCTGCTCGGTGTTGATGGTGTTCATCCTGCACCTGCTGGACAGCAATTCC |
Tissues |
leaf and panicle/root/shoot, seed, pistil |
Exon boundary |
Yes-No |
Splicing signals |
AC-CT |
circRNA sequence |
NA |
Genomic sequence |
CGGAGGAGGGCAAGAGAAGATGGTGGTGATGATGATGCAGAAGAGCTCCCTGGACCTGGTGCTTGTGCCATGTGGTCTGGTGATCATGTTCGGCTACCACCTCATCCTCCTCTACCGGATTCTCCGCCGCCCCGCCGCCACCGTCATCGGCTACGAGAACCACAACAAGCTGGCATGGGTCCGCCGCATGGTGCAGGTAAACCACCCACCGCCGGCCGCCGGCGACATGGAGCAACTGAATTTTCTGTGACAACTGAACAGCTGAATCCAAGTGTGGCCGTGGTGATGGGAGGTTGGTGATTTACCGTGTTGCTGTCGTTGCAGGCGAGCCCGGACGAGACGGGGCTGGCACTGAGCGTCATCTCCAGCAACATCTCGGCGTCGACGAACCTGGCGTCGCTGTGCATCGCGCTGGGCTCGCTCATCGGGGCCTGGGTGAGCAGCACCTCCAAGGTTTTCATGACGGAGCTCGTCTACGGCGACCGCACCCAGGCGACGGCCACCGTGAAGTACATCTCCCTTCTCGTCTGCTTCCTCGTCTCCTTCACTTGCTTCATCCACTCTGCAAGGTTAGCTTCCCTTCAGGCTTCAGCTGCTGCTCACCTCTGAAACCAGCCTCTGTAAATACCTGAAAGAAGGATATTCAAATTTAAATTTTGAAACTTGAATTTAGAAAAATTTCTAGTGGTTACCAGTAAAAAAATACAACCTTTTGCATTTGAATCTTTAAAGTTGAATTTTTGGAGCCACTAATTCTGGAGATACTACCGGTATTCCAACCCTGCTGAGGTAACATAACATGGCATCAAAATCAGAAATTTTCAGACCTGTTTCCTCTGGAGATGCAGGTACTATGTCCAAGCCAGCTTCCTAATAACCACGCTGGATTCTGATGTCCCGGCAAGCTACATCCAGCATGCTGTGATCCGAGGAGGCAACTTCTGGTCAATGGGGCTCCGTGCACTCTACTTCGCGACAACGCTGCTGATGTGGATCTTCGGGCCAATACCAATGTTCACCTGCTCGGTGTTGATGGTGTTCATCCTGCACCTGCTGGACAGCAATTCC |