ncRNA ID | novel_gma_miR975 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:21980492-21980540 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451636;SRR1451648;SRR1451649;SRR1451615 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGUAAGCACCAAUGUAGAAAU - 21 |
Stem-loop(if miRNA) |
--         C           U   CGUAAGCAC AAUGUAGAAAU A   ||||||||| ||||||||||| C   GCAUUCGUG UUACAUCUUUA A CU         A           U |
Stem-loop sequence | CGUAAGCACCAAUGUAGAAAUUACAUAUUUCUACAUUAGUGCUUACGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003553899.3 |
|
2.0 | PREDICTED: Glycine max probable metal-nicotianamine transporter YSL6 (LOC100799897), transcript variant X2, mRNA | probable metal-nicotianamine transporter YSL6(LOC100799897) | coding protein | psRNATarget | |||||||||
XM_006604094.2 |
|
2.0 | PREDICTED: Glycine max probable metal-nicotianamine transporter YSL6 (LOC100799897), transcript variant X1, mRNA | probable metal-nicotianamine transporter YSL6(LOC100799897) | coding protein | psRNATarget |