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BaseInfo

ncRNA ID novel_gma_miR975
Species Glycine max
Class miRNA
Genome position Chr9:21980492-21980540 [+]
Reference genome Glycine_max_v2.0
Source SRR1451636;SRR1451648;SRR1451649;SRR1451615
Length 21
Mature sequence(if miRNA) 1 - CGUAAGCACCAAUGUAGAAAU - 21
Stem-loop(if miRNA) --         C           U
  CGUAAGCAC AAUGUAGAAAU A
  ||||||||| ||||||||||| C
  GCAUUCGUG UUACAUCUUUA A
CU         A           U
Stem-loop sequence CGUAAGCACCAAUGUAGAAAUUACAUAUUUCUACAUUAGUGCUUACGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553899.3
ncRNA:21   UAAAGAUGUAACCACGAAUGC   1
  *|||=|||||||||||||||*
targets:2107   CUUUUUACAUUGGUGCUUACU   2127

2.0 PREDICTED: Glycine max probable metal-nicotianamine transporter YSL6 (LOC100799897), transcript variant X2, mRNA probable metal-nicotianamine transporter YSL6(LOC100799897) coding protein psRNATarget
XM_006604094.2
ncRNA:21   UAAAGAUGUAACCACGAAUGC   1
  *|||=|||||||||||||||*
targets:2116   CUUUUUACAUUGGUGCUUACU   2136

2.0 PREDICTED: Glycine max probable metal-nicotianamine transporter YSL6 (LOC100799897), transcript variant X1, mRNA probable metal-nicotianamine transporter YSL6(LOC100799897) coding protein psRNATarget