Search result

BaseInfo

ncRNA ID	osa_circ_036841
Species	Oryza sativa
Class	circRNA
Genome position	8:16516145-16521841[-/-]
Reference genome	RGAPv7
Source	PlantcircBase
Method	find_circ/NA
Type	exonic
Splice junction sequence	TGGAACAGCCCAAAATGGAACTGTATTGCCCTTCAGTGGATATCTCAAGTCTGTCAGCATGTCACTTCCAACGAAGCGGTGAAAAGGCTCAATTATGTTGAGCATCGTATACCCAGTATGCCATGGTGTAAATCATAGACATTTTTCTTTTTGAAGTAAATTCCACCAAAGACAACCCAGGGCAGCACAATTGCAATAAG
Tissues	root/seed, pistil
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	TGGAACAGCCCAAAATGGAACTGTATTGCCCTTCAGTGGATATCTCAAGTCTGTCAGCATGTCACTTCCAACGAAGCGGTGAAAAGGCTCAATTATGTTGAACAGCCCATAAACAACAGCTAGAAAGATAAGTATCATCCAATCATACAAATGGAATTTTGCCACTTTAATGCCATGAGATCCTATAGTATGGCACCCTAACTGGGTATCAGCCATTATCCCCTAAAATTGAAAATAAACAGAAATGAGTTCATAGTCAGAGAAGGAAAATTGTAAATAACATGAAGGTGATGGATGTAATCCAGTGGTGTTAGGAACATGGAAATGAATAAGGAACAACAAAGGATGTCATGATAGATCATAATCATAAATGTGTTCCGAGTTGCTATTTTCTGTCTTGACAAAGCAATAAAACTTTTCAGTTGGGGTTCTCCAGAATATATAGAACGTAGATGCTGTTTGATCAAAAGTATAAAGTATTGAAAAAAAATGAAAACTACATGTTTGCAGCAATCAGAAAACAGTTAATGAAATTGCAGTATAGGGTGGAAAAAAGTGGCATCAGAACTCATGTAAATTCTAACGTATAACTGTATTTACAAAAGGCATACACCACACAAGTGAGATCATCTTATTCTGTGGGATCCAATTTACTTGGCACTTCGAAGGGCATGTACTATTTGAAAATTCAGAATAATACAAACAATTTACGATATCGATAGCCTACAAAAGGTAGAAGTTCCAAGGCTGTGGTCAAACACTTCAATGTAGCCAGCAATTCACAATAATCACCCATTTCAGTAGCAACAATTCATTCAATCTAAGCTGAAGTCCTGAACCAGCCACCTGATTGAGTACTGAAGTATGAGTGTTTTATTGATAAGATTATACTCATGGCCCGATATTAAAATTTCATCACTGTCATGTGGCCACTTTGGACTTTGCTTGGAAACAATATTCATGCAATCCCTGAGTCCAGTATTTACAGAGTATGAAGTATTCAGTATGACAATACTTAACATGACAATTAATATTCAAACTTTCACCATCAGTAATTTTTTAAATTGTTTGATTATAATTCGTTTGGTTGTACTTGTTGTTAAACTTCCATAATACTAATAGAGTTGACCACCCCACATAAGTCCAAACCTCATATCACTAAAAAATGATAACAGATCTAAACAAAAGCCTTATCATGTTATTAATAAAACAAAAGTAACAACATAATGAAGTACAAACTACCCCTAAAGCACCTTAACAATCTTTGGAAAGGGAAAAACTAAGAAAAAAAATCTCAAATTATCGAGAACTCCACACGGAGAGCACAACAGGTTCTTTCTAATGAATTTCACAGGAAGAAAAGAATAACTGACAGGCTCACTGCCCCGCTGGCGAGATACCAATGGCTCCTCCTCCTCCAGCTCGCACCGACGAGATATGTTACAGTTCTGCCAGATAAAGAAAAATAAAATCAAGAAGTAAAGAACACGGTCACCCCCCCAACCCAAGTGGTCGGCAGGAGAATCTAATCTGAGAATCCATACATGAAATAGATTGGAAATGAGAATGTAAAAAAGAAGAAGAAAATGCGTGCTGCAGACTGCACAGGGTGCTCACCTGGGATCTCGGCGCCGGAGTCGCCCGCAGCGTCGCATTCCCCGGCTTGCCGCGCGGCCGCGAAAGCGAATGGATGGATGGAGACGATGCTGAGTAGCAGCAGGAGTGCAGGAGAGAGGAGGCAACGCGGAAGCAGCATCCCGCAGCAGAAGATGAGGGGAGAAAAGTCCTTCTCTTCTCTGATGGACACGTGTCCACCGCGAATCTGATAAAAGCCATTCTCTCTTCTTAAAAGGCCTTCTTTGGACAGGACTTCTAGTCGGGAGTGGATTTTTTTAAAAAGTTCGATATAAATATTATCTCCGTCCCAAAATAAGTGCAGCCGTAGATATCTGTGCCCAACGTTTGACCGTCCGTCTTATTTAAAAAATTTGTGAAAAAATTAAAAATATTTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAGCAATAAAAATACTAATCATAAAAAAATTTCAAATAAGACGAACGATCAAACGTTGAACGTGAATAGTGCAAAACTGCACTTATTTTGGGACGGAGGGAGTAGTTGTGAAGAATTACGAAAAATATTGAAAATGTTGAGATTCGTGATATCTATCTGAAATCAAGTTTAAATTCGACTAACACATCGAGAAACAAAAATGACAAATTTAGATGTAAATAGTACGTTACTATTCCTGCGCTAAATTTGTCCTTTTTATATCTCAACGTGTGATTTGAGTTTGGACCTAATTTTTTCAGAATTTTTCATAACCATTTGAATTTTTTTTAACAAAACAAGGAGGTATCCCCTCGAGGGATCGAAATAGTTTCCCCTTCCAATCTAATGGATTCGCTGGTACTAAGAGTGAAGAAGATCCTAAGCAATAGGAGTAAGGCTTATTCGGTTTTAATAATTTTTATAGGGTTATAGTATAATTTAAATCTTAGAATTTTTTTCATATATGCATCATTTGTTTTATAGGAATAGATCGTATCGAATTTCGGTAGTCTTAAAACAACTTTAGCCGTGTTCTTTAGTGGGAGTTGGCAACTCAAACATATAAAATAAAGCTGTTCATTAGTGTGTAATTAATTAAGTATCAGTTTTTTTTAAAAAAAAATCGATCTATATGATTTTATAAAGCAACTTTTGTATAGAAATTTTTTTAAAAAAATCACACCGTTGAGCAGTTTAGAAAGCGTGTGGACAGTTAACGAGAGAGATGAGTTGGGAAAGCTAACCAAAGACCTCAGTCTTGCACTTCAAAAGTTTTGTAACAAATACTCCCTCCGTCCTAAAAACCTAGGTTGGATGTGATTCCACTTAGAACAACGAATCTAGATAAAAGGTTATCCAAATTCGTCGTCCTAGGTAAAATCACGTCCCCACCTAGGTTAGCATTTTTTGGGACGGAGATTTTACCTCCCCACCTAGGTTAGCATTATTTCGGACGGAGGGAGTAACATTTTTTGGGACGGAGGGAGTATAGTGCATATGGCATTATAATTCTTTACTTTTTCTATTTCTATGATTTGGAAATCCTATGATGGCTCAATTTTCTTCCTCGTATAACTACTACATTGTTATGGAAATGTGGAAGTCAGGTATCACATTCTCAGATTTCAAGGAAACCAATATGCTCATGTAAAAATCAAGACAAATTGACCCTCCAAACCGCACCTCATTTGTTCTGTTTGTAACCAATATCTTGCTTCAATACAAACAATAACTATGAGCAGCCTTCAAAAACAAAACAAAAAATAACTATGAGCATTTACACAACGGAGCAACTAAAACTGCAATAAACTGGATCAGACAAATCAGCAACATTTGTAATTTACATTGGGACCAATTTCAGCACAACCAGAGCGTAGGATAGGTACATCAGCAGGGTAACAAAGAGGACTGTGGAATATGATTAAGAGTGCAAACTCCCACTGTAATTTACAGCCAACACCCACAACGAGTTTAAGTCAGCATATAACGGCCAGCACCGAGTTGCAAGGAACTCTCAATGATGAGACGATCACCTGAGATGACAAGCACAATTCTACCTGGCAAAACTCTACCTATTCTTGCGCAATGTACATGGAAATGGGGGAACCGTACGAACTAGTCATGTTGTAGAACTTAAAACTCAGAAAGGCCGAAGAATCCACACAACATCAAGATACTTGTCGCCTCATGTTTCAGCCTCTCCTACCAGACTCCATCGTGTCTAAAATAGGACTGGTGTCTCTCAGGGAAATGGCACCATGGCCTTCGTCAGCAATCTCAATGTCTGTTGGTCCCATGTTGTATGAGTTTGCAATGCCGTTGCTTTGTGTGTCAGCTAGCTGTTGGAAGTATGCATGGGGCCATACAGCTGCAAATGCAAAGGAACATGAATATACTGTAAAATATGTCGATCAAGGTCCAACATATCATCTATATCAGAAGGGAAACGTACCATCAGCATCAAATGGATATGGGAAGAACTGCAGATAACAAAACGAAGAAACCGTAAGACCTGAAAAAGGGGAAAGAAGAATGAGACGAGATCCATGCCTACTTTCTGACAACGAGAGTGTTCTAAATGGTTGAGAGAAAGGCTTCAAAATAACAAACCTATAATGCCACCTGCAAATACGTCTTGCCAGTGATGCCAGTAATCATCAACTCGAGAGACTGCCACAAGGGACGCAACAAGTAGAGGCAGAAATACTATGCATAACTTTGCAATGTGGCCTTTGCGATCAAAAGCCTTAAGTTTACCAGCCAAGTACCACGCAAGAAAACCTAGACCAGCAAAAGACCCTGCAGAAGGTGAGTGAGAACCACAACACATACGTCAGATTACAGACAACAGATCCACCAAGTAATGAAATTCGAAAATATATGGAGAACAAACTGTATATGGTGCTACATGCCAGGAAAAAATTATATACTCCCTCTCCTCTGGTCATGAAAAGCTATTGTTTTGAACACCCCTCTAGCAAAACTTTCAAAACTTCAACATCAAATCTCTTTAATTATTATTAGATAAATGAAAACTATATTCATAGATTTGTTTGACAATTTTATAGCACTATACTTTAATCTGATTATACAAATAATTTACTATAAAATCAGTGGTCAAAGTTGTATGTCAGATATCATGAGGATGTCCAGAAACACATTTTTCTGTACAGGAGGAAGTATAAACAATTATAAGAAAAAGATGAGCTACACCATTTATTTGATAGCCTCGGAGTCTTAATCATAGATACAACATATAGGTGTTAAGGGTACCAACATGAATAAATTCAATTTTTCAATAAATGTCCTACATAGTTACCAAGAGAATATAGCATTGAATTTAAACTAGTCAAGAATTTCATTTATTCATAAATGTCCTGCATAGTTACCAGGAGCACATCAGATTGGAGAGCAGTACTCCGAACAATGCCCTACATGAAGGCTGAGGCAACTACTAAAATACTCGGAACTGTTGCAAAAGAAAAAATTGGAGAAAAATCCTTGGAAATGTATGTAGAGAATGTGGAGAAACAGATGTAAAAAATGCATGTTGCAAGGCATGTAAAGCTCGATATCAACTCAGAAACATACAACGGTACTTCAAAACTTAAAAGTACCGATGCGTTGCATGTCTTACATGAAGAATGCCCACTTGGAAAGCTCTTGTGGCCTTCCTTGATAACACTCTTTTCTCCATGGCATATGACATTTGTAGTGACATTATCAAACTTCTGAAAAATGAAACGATTTGTTACTTCAATATAACCTGCAGACTACATGAAGTTTAATATCTGAGATCAGGACACTAGCACAAGGAGATTACAGGTATTCCATCAGGGAAACAACGCCAAAAGAAATCTGGGCGAGGACGACCAACACCATCCTTAATTGCATCAGTAATCACAGCAGTTATAAGTACCGAATATAGAATCCCTGCACAAACTCTATGGTTAAATTATATGGTTCAGCATGAACCAAAGATGTAACTTCAATAGATATCTACAAATGAGAGCATCGTATACCCAGTATGCCATGGTGTAAATCATAGACATTTTTCTTTTTGAAGTAAATTCCACCAAAGACAACCCAGGGCAGCACAATTGCAATAAG