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BaseInfo

ncRNA ID novel_gma_miR970
Species Glycine max
Class miRNA
Genome position Chr7:22772145-22772195 [+]
Reference genome Glycine_max_v2.0
Source SRR1451636
Length 21
Mature sequence(if miRNA) 31 - CCUUAUGGAUCAACUUGAUCC - 51
Stem-loop(if miRNA) --                   AUCC
  AUCAAGUUGAUCCGUAAGG    U
  |||||||||||||||||||    U
  UAGUUCAACUAGGUAUUCC    A
CC                   GAAU
Stem-loop sequence AUCAAGUUGAUCCGUAAGGAUCCUUAUAAGCCUUAUGGAUCAACUUGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:21   CCUAGUUCAACUAGGUAUUCC   1
  |*||||||||||||||*||||
targets:1163   GAAUCAAGUUGAUCCACAAGG   1183

1.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
XM_006583732.2
ncRNA:21   CCUAGU-UCAACUAGGUAUUCC   1
  ***|||-|||||||||||||||
targets:696   UUCUCAUAGUUGAUCCAUAAGG   717

3.0 PREDICTED: Glycine max protein TRANSPORT INHIBITOR RESPONSE 1-like (LOC100788342), transcript variant X3, mRNA protein TRANSPORT INHIBITOR RESPONSE 1-like(LOC100788342) coding protein psRNATarget
XM_003528379.3
ncRNA:21   CCUAGU-UCAACUAGGUAUUCC   1
  ***|||-|||||||||||||||
targets:696   UUCUCAUAGUUGAUCCAUAAGG   717

3.0 PREDICTED: Glycine max protein TRANSPORT INHIBITOR RESPONSE 1-like (LOC100788342), transcript variant X2, mRNA protein TRANSPORT INHIBITOR RESPONSE 1-like(LOC100788342) coding protein psRNATarget
XM_006583731.2
ncRNA:21   CCUAGU-UCAACUAGGUAUUCC   1
  ***|||-|||||||||||||||
targets:696   UUCUCAUAGUUGAUCCAUAAGG   717

3.0 PREDICTED: Glycine max protein TRANSPORT INHIBITOR RESPONSE 1-like (LOC100788342), transcript variant X1, mRNA protein TRANSPORT INHIBITOR RESPONSE 1-like(LOC100788342) coding protein psRNATarget