ncRNA ID | novel_gma_miR968 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:39742556-39742635 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451636 |
Length | 21 |
Mature sequence(if miRNA) | 60 - AGAUCCAAUCCAUUUAAGUGG - 80 |
Stem-loop(if miRNA) |
--                        C  U  CUA     U   ACUUAAAUGGAUUGGAUCUUGAAU UA AU   UAUUU U   |||||||||||||||||||||||| || ||   ||||| U   UGAAUUUACCUAACCUAGAACUUA GU UA   AUAAA U GG                        A  U  ---     A |
Stem-loop sequence | ACUUAAAUGGAUUGGAUCUUGAAUCUAUAUCUAUAUUUUUUUAAAAUAAUUUGAAUUCAAGAUCCAAUCCAUUUAAGUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001251076.2 |
|
3.0 | Glycine max seed maturation protein PM31 (PM31), mRNA | seed maturation protein PM31(PM31) | coding protein | psRNATarget | |||||||||
AK244192.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-02-F14 | NA | coding protein | psRNATarget | |||||||||
AF117885.1 |
|
3.0 | Glycine max seed maturation protein PM31 (PM31) mRNA, complete cds | NA | coding protein | psRNATarget |