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BaseInfo

ncRNA ID novel_gma_miR968
Species Glycine max
Class miRNA
Genome position Chr6:39742556-39742635 [+]
Reference genome Glycine_max_v2.0
Source SRR1451636
Length 21
Mature sequence(if miRNA) 60 - AGAUCCAAUCCAUUUAAGUGG - 80
Stem-loop(if miRNA) --                        C  U  CUA     U
  ACUUAAAUGGAUUGGAUCUUGAAU UA AU   UAUUU U
  |||||||||||||||||||||||| || ||   ||||| U
  UGAAUUUACCUAACCUAGAACUUA GU UA   AUAAA U
GG                        A  U  ---     A
Stem-loop sequence ACUUAAAUGGAUUGGAUCUUGAAUCUAUAUCUAUAUUUUUUUAAAAUAAUUUGAAUUCAAGAUCCAAUCCAUUUAAGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001251076.2
ncRNA:21   GGUGAAUUUACCUAACCUAGA   1
  **|||*|=||||||||||||*
targets:30   GAACUAAGAUGGAUUGGAUCG   50

3.0 Glycine max seed maturation protein PM31 (PM31), mRNA seed maturation protein PM31(PM31) coding protein psRNATarget
AK244192.1
ncRNA:21   GGUGAAUUUACCUAACCUAGA   1
  **|||*|=||||||||||||*
targets:31   GAACUAAGAUGGAUUGGAUCG   51

3.0 Glycine max cDNA, clone: GMFL01-02-F14 NA coding protein psRNATarget
AF117885.1
ncRNA:21   GGUGAAUUUACCUAACCUAGA   1
  **|||*|=||||||||||||*
targets:24   GAACUAAGAUGGAUUGGAUCG   44

3.0 Glycine max seed maturation protein PM31 (PM31) mRNA, complete cds NA coding protein psRNATarget