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BaseInfo

ncRNA ID	novel_gma_miR964
Species	Glycine max
Class	miRNA
Genome position	Chr15:20148592-20148676 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294479
Length	22
Mature sequence(if miRNA)	1 - UUUAGGGUUUAGGGUUUAGUUC - 22
Stem-loop(if miRNA)	--U     G      G         --U     ---UUA GG  A    UUAGG UUUAGG UUUAGUUCU   AUUUU      G  UU A    ||||| |||||| |||||||||   |||||      |  ||    GAUUU GGAUUU GGAUUAGGG   UGGAA      C  GG G UUU     G      G         UAU     UGGAAA UU  G
Stem-loop sequence	UUUAGGGUUUAGGGUUUAGUUCUUAUUUUUUAGGGUUAAGGGGUUCAAAGGUAAGGUUAUGGGAUUAGGGUUUAGGGUUUAGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003552534.3	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   *|||*||||||||||||||||| targets:166   CAACCAAACCCUAAACCCUAAA   187 Target Full Sequence	1.0	PREDICTED: Glycine max transcription initiation factor TFIID subunit 8-like (LOC100815889), transcript variant X1, mRNA	transcription initiation factor TFIID subunit 8-like(LOC100815889)	coding protein	psRNATarget
XM_003531815.3	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   *|||*||||||||||||||||| targets:203   CAACCAAACCCUAAACCCUAAA   224 Target Full Sequence	1.0	PREDICTED: Glycine max transcription initiation factor TFIID subunit 8-like (LOC100778210), mRNA	transcription initiation factor TFIID subunit 8-like(LOC100778210)	coding protein	psRNATarget
XM_006590135.2	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   **=|*||||||||||||||||| targets:158   CUGCAAAACCCUAAACCCUAAA   179 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At2g16880 (LOC100808380), mRNA	pentatricopeptide repeat-containing protein At2g16880(LOC100808380)	coding protein	psRNATarget
XM_014773294.1	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   *|||*||||||||||||||||* targets:65   AAACAAAACCCUAAACCCUAAC   86 Target Full Sequence	2.0	PREDICTED: Glycine max transducin beta-like protein 3 (LOC106797977), mRNA	transducin beta-like protein 3(LOC106797977)	coding protein	psRNATarget
XM_003549573.3	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   *|||*||||||||||||||||* targets:61   AAACAAAACCCUAAACCCUAAC   82 Target Full Sequence	2.0	PREDICTED: Glycine max transducin beta-like protein 3 (LOC100783244), transcript variant X1, mRNA	transducin beta-like protein 3(LOC100783244)	coding protein	psRNATarget
XM_003530961.3	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   |*||*||||||||||||||||* targets:10   GCACAAAACCCUAAACCCUAAU   31 Target Full Sequence	2.0	PREDICTED: Glycine max heat shock 70 kDa protein, mitochondrial-like (LOC100811003), mRNA	heat shock 70 kDa protein, mitochondrial-like(LOC100811003)	coding protein	psRNATarget
XM_003529027.3	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   **=|||||||=||||||||||* targets:25   UUGCUAAACCUUAAACCCUAAU   46 Target Full Sequence	2.5	PREDICTED: Glycine max probable protein arginine N-methyltransferase 1 (LOC100781777), mRNA	probable protein arginine N-methyltransferase 1(LOC100781777)	coding protein	psRNATarget
XM_003556277.3	ncRNA:20   UGAUUUGGGAUUUGGGAUUU   1   ||*|||||||||||||||=| targets:1   ACAAAACCCUAAACCCUAGA   20 Target Full Sequence	2.5	PREDICTED: Glycine max chaperonin CPN60-2, mitochondrial (LOC100820546), mRNA	chaperonin CPN60-2, mitochondrial(LOC100820546)	coding protein	psRNATarget
XM_014765941.1	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   *=**|=|||||||||||||||= targets:23   UGUGUGAACCCUAAACCCUAAG   44 Target Full Sequence	3.0	PREDICTED: Glycine max polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like (LOC100785120), transcript variant X2, mRNA	polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like(LOC100785120)	coding protein	psRNATarget
XM_003541829.3	ncRNA:22   CUUGAUUUGGGAUUUGGGAUUU   1   *=**|=|||||||||||||||= targets:22   UGUGUGAACCCUAAACCCUAAG   43 Target Full Sequence	3.0	PREDICTED: Glycine max polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like (LOC100785120), transcript variant X1, mRNA	polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like(LOC100785120)	coding protein	psRNATarget
XM_006573289.2	ncRNA:22   CUUG-AUUUGGGAUUUGGGAUUU   1   **||-||*||||||||||||||| targets:1735   UUACAUAUACCCUAAACCCUAAA   1757 Target Full Sequence	3.0	PREDICTED: Glycine max alcohol dehydrogenase-like 4 (LOC100787307), mRNA	alcohol dehydrogenase-like 4(LOC100787307)	coding protein	psRNATarget
AK245163.1	ncRNA:22   CUUGAUUU-GGGAUUUGGGAUUU   1   ***|||||-|||||||||||||* targets:48   UUUCUAAAACCCUAAACCCUAAC   70 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-22-J15	NA	coding protein	psRNATarget
XM_003522744.3	ncRNA:22   CUUGAUUU-GGGAUUUGGGAUUU   1   ***|||||-|||||||||||||* targets:218   UUUCUAAAACCCUAAACCCUAAC   240 Target Full Sequence	3.0	PREDICTED: Glycine max protein ROOT PRIMORDIUM DEFECTIVE 1-like (LOC100813429), mRNA	protein ROOT PRIMORDIUM DEFECTIVE 1-like(LOC100813429)	coding protein	psRNATarget