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BaseInfo

ncRNA ID	novel_gma_miR960
Species	Glycine max
Class	miRNA
Genome position	Chr5:1544299-1544384 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451636;SRR1451646;SRR1451647;SRR1451648
Length	21
Mature sequence(if miRNA)	1 - CUACCUCCUUUCCUUUUUAUA - 21
Stem-loop(if miRNA)	--         -                 C   -UG     AUA   CUACCUCCU UUCCUUUUUAUAGGAAA UAG   AUGGU   U   ||||||||| ||||||||||||||||| |||   |||||   U   GAUGGAGGG AAGGAAAAAUAUUCUUU AUC   UAUCA   U AU         C                 -   CAA     CAU
Stem-loop sequence	CUACCUCCUUUCCUUUUUAUAGGAAACUAGUGAUGGUAUAUUUUACACUAUAACCUAUUUCUUAUAAAAAGGAACGGGAGGUAGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014770937.1	ncRNA:21   AUAUUUUUCCUUUCCUCCAUC   1   *|*|=|||||||||||||||* targets:4030   GAGAGAAAGGAAAGGAGGUAA   4050 Target Full Sequence	3.0	PREDICTED: Glycine max histidine kinase 2-like (LOC100781655), transcript variant X6, mRNA	histidine kinase 2-like(LOC100781655)	coding protein	psRNATarget
XM_014770936.1	ncRNA:21   AUAUUUUUCCUUUCCUCCAUC   1   *|*|=|||||||||||||||* targets:4877   GAGAGAAAGGAAAGGAGGUAA   4897 Target Full Sequence	3.0	PREDICTED: Glycine max histidine kinase 2-like (LOC100781655), transcript variant X5, mRNA	histidine kinase 2-like(LOC100781655)	coding protein	psRNATarget
XM_014770934.1	ncRNA:21   AUAUUUUUCCUUUCCUCCAUC   1   *|*|=|||||||||||||||* targets:4915   GAGAGAAAGGAAAGGAGGUAA   4935 Target Full Sequence	3.0	PREDICTED: Glycine max histidine kinase 2-like (LOC100781655), transcript variant X4, mRNA	histidine kinase 2-like(LOC100781655)	coding protein	psRNATarget
XM_006575676.2	ncRNA:21   AUAUUUUUCCUUUCCUCCAUC   1   *|*|=|||||||||||||||* targets:5004   GAGAGAAAGGAAAGGAGGUAA   5024 Target Full Sequence	3.0	PREDICTED: Glycine max histidine kinase 2-like (LOC100781655), transcript variant X2, mRNA	histidine kinase 2-like(LOC100781655)	coding protein	psRNATarget
XM_006575677.2	ncRNA:21   AUAUUUUUCCUUUCCUCCAUC   1   *|*|=|||||||||||||||* targets:5061   GAGAGAAAGGAAAGGAGGUAA   5081 Target Full Sequence	3.0	PREDICTED: Glycine max histidine kinase 2-like (LOC100781655), transcript variant X3, mRNA	histidine kinase 2-like(LOC100781655)	coding protein	psRNATarget
XM_006575675.2	ncRNA:21   AUAUUUUUCCUUUCCUCCAUC   1   *|*|=|||||||||||||||* targets:5150   GAGAGAAAGGAAAGGAGGUAA   5170 Target Full Sequence	3.0	PREDICTED: Glycine max histidine kinase 2-like (LOC100781655), transcript variant X1, mRNA	histidine kinase 2-like(LOC100781655)	coding protein	psRNATarget