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BaseInfo

ncRNA ID	novel_gma_miR955
Species	Glycine max
Class	miRNA
Genome position	Chr11:21306503-21306663 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451636
Length	21
Mature sequence(if miRNA)	1 - CCUUAUGGAUCAACUUGAUCC - 21
Stem-loop(if miRNA)	--     UG                  AU     U    CAGG           G               C   G     A   CCUUA  GAUCAACUUGAUCCGUAA  UGUGU GACA    UUACGGAUCAA UUGAUCCAUAAGCUU UUU GGAUC A   |||||  ||||||||||||||||||  ||||| ||||    ||||||||||| ||||||||||||||| ||| ||||| C   GGAAU  UUAGUUGAACUAGGUAUU  ACACA CUGU    AAUGCCUAGUU AACUAGGUAUUCGAA AAA CCUAG A UU     GU                  CU     U    --CA           G               U   G     U
Stem-loop sequence	CCUUAUGGAUCAACUUGAUCCGUAAAUUGUGUUGACACAGGUUACGGAUCAAGUUGAUCCAUAAGCUUCUUUGGGAUCAACAUGAUCCGAAAUAAGCUUAUGGAUCAAGUUGAUCCGUAAACUGUCUACACAUCUUAUGGAUCAAGUUGAUUUGUAAGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006600975.2	ncRNA:21   CCUAGUUCAACUAGGUAUUCC   1   |*||||||||||||||*|||| targets:1163   GAAUCAAGUUGAUCCACAAGG   1183 Target Full Sequence	1.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_006583732.2	ncRNA:21   CCUAGU-UCAACUAGGUAUUCC   1   ***|||-||||||||||||||| targets:696   UUCUCAUAGUUGAUCCAUAAGG   717 Target Full Sequence	3.0	PREDICTED: Glycine max protein TRANSPORT INHIBITOR RESPONSE 1-like (LOC100788342), transcript variant X3, mRNA	protein TRANSPORT INHIBITOR RESPONSE 1-like(LOC100788342)	coding protein	psRNATarget
XM_003528379.3	ncRNA:21   CCUAGU-UCAACUAGGUAUUCC   1   ***|||-||||||||||||||| targets:696   UUCUCAUAGUUGAUCCAUAAGG   717 Target Full Sequence	3.0	PREDICTED: Glycine max protein TRANSPORT INHIBITOR RESPONSE 1-like (LOC100788342), transcript variant X2, mRNA	protein TRANSPORT INHIBITOR RESPONSE 1-like(LOC100788342)	coding protein	psRNATarget
XM_006583731.2	ncRNA:21   CCUAGU-UCAACUAGGUAUUCC   1   ***|||-||||||||||||||| targets:696   UUCUCAUAGUUGAUCCAUAAGG   717 Target Full Sequence	3.0	PREDICTED: Glycine max protein TRANSPORT INHIBITOR RESPONSE 1-like (LOC100788342), transcript variant X1, mRNA	protein TRANSPORT INHIBITOR RESPONSE 1-like(LOC100788342)	coding protein	psRNATarget