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BaseInfo

ncRNA ID bra-miR9564-3p
Species Brassica rapa
Class miRNA
Genome position chrA5:12733419-12733651 [-]
Reference genome Brapa_1.1
Source miRBase
Length 22
Mature sequence(if miRNA) 86 - CGAGCUGUGUAAUCGUUUUGUU - 107
Stem-loop(if miRNA) UUU                                                                                                                 A
   CCGAAAACAUUUCGGAAGGAUAAAACUUGUUCUCCCAAAAAAACCGCUGAAAAACCCCUACGUUAAUCGCGGAAAAAGGAAACACAACAAAACGAUUACACAGCUCGGUCGCU C
   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
   GGCUUUUGUAAAGCCUUCCUAUUUUGAACAAGAGGGUUUUUUUGGCGACUUUUUGGGGAUGCAAUUAGCGCCUUUUUCCUUUGUGUUGUUUUGCUAAUGUGUCGAGCCAGCGA G
---                                                                                                                 U
Stem-loop sequence UUUCCGAAAACAUUUCGGAAGGAUAAAACUUGUUCUCCCAAAAAAACCGCUGAAAAACCCCUACGUUAAUCGCGGAAAAAGGAAACACAACAAAACGAUUACACAGCUCGGUCGCUACGUAGCGACCGAGCUGUGUAAUCGUUUUGUUGUGUUUCCUUUUUCCGCGAUUAACGUAGGGGUUUUUCAGCGGUUUUUUUGGGAGAACAAGUUUUAUCCUUCCGAAAUGUUUUCGG

Reference

1 PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis";
Jiang J, Lv M, Liang Y, Ma Z, Cao J;
BMC Genomics. 15:146(2014).