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BaseInfo

ncRNA ID	novel_gma_miR943
Species	Glycine max
Class	miRNA
Genome position	Chr20:8868925-8869031 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451636
Length	21
Mature sequence(if miRNA)	1 - CUACAUCGGUUAUUAGGAAAC - 21
Stem-loop(if miRNA)	AUACGAAUAA     --        CU   - CAUGGGUAACAUUCUACAAUGCUUG           CUGAU  GUAGAAUG  UUA C                         A           |||||  ||||||||  ||| |                         C           GAUUA  GGCUACAU  CUU G                         A -----CAAAG     UU        --   A CAAUCGAAAGAUGUAGCCCACACCG
Stem-loop sequence	AUACGAAUAACUGAUGUAGAAUGCUUUACCAUGGGUAACAUUCUACAAUGCUUGACAGCCACACCCGAUGUAGAAAGCUAACGAUUCUACAUCGGUUAUUAGGAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767461.1	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   *|||||||||||||||||||| targets:2220   UUUUCCUAAUAACCGAUGUAG   2240 Target Full Sequence	0.0	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014767461.1	ncRNA:21   CAA-AGGAUUAUUGGCUACAUC   1   |||-|||||||||||||||||| targets:2263   GUUAUCCUAAUAACCGAUGUAG   2284 Target Full Sequence	2.0	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014771283.1	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   *|||||*=||||||||||||| targets:1840   UUUUCCAGAUAACCGAUGUAG   1860 Target Full Sequence	2.0	PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X1, mRNA	protein NRT1/ PTR FAMILY 7.3-like(LOC100803433)	coding protein	psRNATarget
XM_014771284.1	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   *|||||*=||||||||||||| targets:1904   UUUUCCAGAUAACCGAUGUAG   1924 Target Full Sequence	2.0	PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X2, mRNA	protein NRT1/ PTR FAMILY 7.3-like(LOC100803433)	coding protein	psRNATarget
XM_006598094.2	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   ****||*|||||||||||||| targets:1156   UGCCCCCAAUAACCGAUGUAG   1176 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   ****||*|||||||||||||| targets:1269   UGCCCCCAAUAACCGAUGUAG   1289 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   ****||*|||||||||||||| targets:1429   UGCCCCCAAUAACCGAUGUAG   1449 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   ****||*|||||||||||||| targets:1706   UGCCCCCAAUAACCGAUGUAG   1726 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:21   CAAAGGAUUAUUGGCUACAUC   1   ****||*|||||||||||||| targets:1869   UGCCCCCAAUAACCGAUGUAG   1889 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget