ncRNA ID | novel_gma_miR942 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:18050223-18050305 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451636;SRR1451619 |
Length | 22 |
Mature sequence(if miRNA) | 1 - ACCAUCCCCAAUUGCCCACCUU - 22 |
Stem-loop(if miRNA) |
--     -    C   C     C CAAAUCA  U  CC AUUU   GGUGG CGAU GGG GAUGG G       AC CU  C    C   ||||| |||| ||| ||||| |       || ||  |   CCACC GUUA CCC CUACC C       UG GA  G    C UU     C    A   -     A ACGAAUA  -  CU AACA |
Stem-loop sequence | GGUGGCGAUCGGGCGAUGGCGCAAAUCAACUCUCCCAUUUCCACAAGUCAGGUAUAAGCACACCAUCCCCAAUUGCCCACCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003534663.3 |
|
2.5 | PREDICTED: Glycine max probable F-box protein At4g22030 (LOC100801646), mRNA | probable F-box protein At4g22030(LOC100801646) | coding protein | psRNATarget | |||||||||
XM_003534659.3 |
|
2.5 | PREDICTED: Glycine max probable F-box protein At4g22030 (LOC100799496), mRNA | probable F-box protein At4g22030(LOC100799496) | coding protein | psRNATarget |