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BaseInfo

ncRNA ID	novel_gma_miR941
Species	Glycine max
Class	miRNA
Genome position	Chr1:40624541-40624677 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294479
Length	21
Mature sequence(if miRNA)	1 - ACCGAUGUAGAAUGUCAGAUU - 21
Stem-loop(if miRNA)	--   A                UUC                       G -   C           UGG   UCU ACAUUCUACAUCGGUU   AGGACAACCGAUGUAGAAAUUUG C AUU UAAGACGGGUU   A   ||| ||||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||   AGA UGUAAGAUGUAGCCAA   UCCUGUUGGCUACAUCUUUAGAC G UAA AUUCUGCCCAA   G UU   C                UAA                       G A   A           CUG
Stem-loop sequence	UCUAACAUUCUACAUCGGUUUUCAGGACAACCGAUGUAGAAAUUUGGCAUUCUAAGACGGGUUUGGAGGUCAACCCGUCUUAAAAUAGGCAGAUUUCUACAUCGGUUGUCCUAAUAACCGAUGUAGAAUGUCAGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767461.1	ncRNA:21   UUAGACUGUAAGAUGUAGCCA   1   *=||*|||||||||||||||| targets:2145   UGUCCGACAUUCUACAUCGGU   2165 Target Full Sequence	1.0	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_006598094.2	ncRNA:21   UUAGACUGUAAGAUGUAGCCA   1   |=**|*||||||||||||||| targets:972   AGGAUAACAUUCUACAUCGGU   992 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:21   UUAGACUGUAAGAUGUAGCCA   1   |=**|*||||||||||||||| targets:1085   AGGAUAACAUUCUACAUCGGU   1105 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:21   UUAGACUGUAAGAUGUAGCCA   1   |=**|*||||||||||||||| targets:1245   AGGAUAACAUUCUACAUCGGU   1265 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:21   UUAGACUGUAAGAUGUAGCCA   1   |=**|*||||||||||||||| targets:1522   AGGAUAACAUUCUACAUCGGU   1542 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:21   UUAGACUGUAAGAUGUAGCCA   1   |=**|*||||||||||||||| targets:1685   AGGAUAACAUUCUACAUCGGU   1705 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget