Search result

BaseInfo

ncRNA ID novel_gma_miR931
Species Glycine max
Class miRNA
Genome position Chr19:30978571-30978626 [-]
Reference genome Glycine_max_v2.0
Source SRR1451636;SRR1451661
Length 21
Mature sequence(if miRNA) 36 - UUAAUCCGUAUGACUCAUAUG - 56
Stem-loop(if miRNA) --             C C         A
  UUAAUCCGUAUGA U AUAUGGAUU A
  ||||||||||||| | |||||||||
  AAUUAGGCAUACU A UAUGCCUAA A
UG             A A         U
Stem-loop sequence UUAAUCCGUAUGACUCAUAUGGAUUAAAUAAUCCGUAUAAAUCAUACGGAUUAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573065.2
ncRNA:21   GUAUACUCAGUAUGCCUAAUU   1
  |=|||||*||||||||||*||
targets:3919   CGUAUGACUCAUACGGAUGAA   3939

2.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X2, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773439.1
ncRNA:21   GUAUACUCAGUAUGCCUAAUU   1
  |=|||||*||||||||||*||
targets:3919   CGUAUGACUCAUACGGAUGAA   3939

2.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X3, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773434.1
ncRNA:21   GUAUACUCAGUAUGCCUAAUU   1
  |=|||||*||||||||||*||
targets:3919   CGUAUGACUCAUACGGAUGAA   3939

2.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X1, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget