Search result

BaseInfo

ncRNA ID novel_gma_miR926
Species Glycine max
Class miRNA
Genome position Chr1:32636382-32636441 [-]
Reference genome Glycine_max_v2.0
Source SRR1451636
Length 21
Mature sequence(if miRNA) 40 - AUCUUCAUCGUCAUGUCCAUC - 60
Stem-loop(if miRNA) AUCU        AU   -CA      AUUA
    UCAUCGUC  GUC   UCAAAU    A
    ||||||||  |||   ||||||    A
    AGUGGUAG  UAG   GGUUUG    A
-UGU        -C   CCC      AAUU
Stem-loop sequence AUCUUCAUCGUCAUGUCCAUCAAAUAUUAAAAUUAAGUUUGGCCCGAUCGAUGGUGAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593977.2
ncRNA:21   CUACCUGUACUGCUACUUCUA   1
  ||||||*|||||||||||||*
targets:575   GAUGGAGAUGACGAUGAAGAA   595

2.0 PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X5, mRNA uncharacterized LOC100793067(LOC100793067) coding protein psRNATarget
XM_006593975.2
ncRNA:21   CUACCUGUACUGCUACUUCUA   1
  ||||||*|||||||||||||*
targets:630   GAUGGAGAUGACGAUGAAGAA   650

2.0 PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X4, mRNA uncharacterized LOC100793067(LOC100793067) coding protein psRNATarget
XM_006593974.2
ncRNA:21   CUACCUGUACUGCUACUUCUA   1
  ||||||*|||||||||||||*
targets:633   GAUGGAGAUGACGAUGAAGAA   653

2.0 PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X3, mRNA uncharacterized LOC100793067(LOC100793067) coding protein psRNATarget
XM_003542387.3
ncRNA:21   CUACCUGUACUGCUACUUCUA   1
  ||||||*|||||||||||||*
targets:636   GAUGGAGAUGACGAUGAAGAA   656

2.0 PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X2, mRNA uncharacterized LOC100793067(LOC100793067) coding protein psRNATarget
XM_006593973.2
ncRNA:21   CUACCUGUACUGCUACUUCUA   1
  ||||||*|||||||||||||*
targets:639   GAUGGAGAUGACGAUGAAGAA   659

2.0 PREDICTED: Glycine max uncharacterized LOC100793067 (LOC100793067), transcript variant X1, mRNA uncharacterized LOC100793067(LOC100793067) coding protein psRNATarget
XM_003533712.3
ncRNA:21   CUACCUGUACUGCUACUUCUA   1
  ||||||*||||||||||=|||
targets:1051   GAUGGAGAUGACGAUGAGGAU   1071

2.5 PREDICTED: Glycine max nucleosome assembly protein 1;3-like (LOC100783783), transcript variant X2, mRNA nucleosome assembly protein 1;3-like(LOC100783783) coding protein psRNATarget
XM_003533713.3
ncRNA:21   CUACCUGUACUGCUACUUCUA   1
  ||||||*||||||||||=|||
targets:1050   GAUGGAGAUGACGAUGAGGAU   1070

2.5 PREDICTED: Glycine max nucleosome assembly protein 1;3-like (LOC100783783), transcript variant X1, mRNA nucleosome assembly protein 1;3-like(LOC100783783) coding protein psRNATarget