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BaseInfo

ncRNA ID novel_gma_miR912
Species Glycine max
Class miRNA
Genome position Chr16:8106086-8106163 [+]
Reference genome Glycine_max_v2.0
Source SRR1451636
Length 21
Mature sequence(if miRNA) 58 - UCUUGUGCAAAUCUUUGAAAA - 78
Stem-loop(if miRNA) --           U          A A        AAAA
  UUCAAAGAUUU CACAGGAAAU G GAAAACAA    A
  ||||||||||| |||||||||| | ||||||||
  AAGUUUCUAAA GUGUUCUUUA C CUUUUGUU    A
AA           C          G A        GGAA
Stem-loop sequence UUCAAAGAUUUUCACAGGAAAUAGAGAAAACAAAAAAAAAAGGUUGUUUUCACGAUUUCUUGUGCAAAUCUUUGAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768152.1
ncRNA:21   AAAAGUUUCUAAACGUGUUCU   1
  *|||==|||||||||||||||
targets:486   CUUUUGAAGAUUUGCACAAGA   506

2.0 PREDICTED: Glycine max probable protein phosphatase 2C 10 (LOC102667117), transcript variant X2, mRNA probable protein phosphatase 2C 10(LOC102667117) coding protein psRNATarget
XM_006597286.2
ncRNA:21   AAAAGUUUCUAAACGUGUUCU   1
  *|||==|||||||||||||||
targets:482   CUUUUGAAGAUUUGCACAAGA   502

2.0 PREDICTED: Glycine max probable protein phosphatase 2C 10 (LOC102667117), transcript variant X1, mRNA probable protein phosphatase 2C 10(LOC102667117) coding protein psRNATarget
XM_006590941.2
ncRNA:21   AAAAGUUUCUAAACGUGUUCU   1
  ***|*=|||||||||||||||
targets:2070   AGCUAGAAGAUUUGCACAAGA   2090

3.0 PREDICTED: Glycine max 125 kDa kinesin-related protein-like (LOC100784725), mRNA 125 kDa kinesin-related protein-like(LOC100784725) coding protein psRNATarget