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BaseInfo

ncRNA ID	novel_gma_miR877
Species	Glycine max
Class	miRNA
Genome position	Chr8:29937820-29937868 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451635
Length	21
Mature sequence(if miRNA)	1 - AUUAACUAAUUUGUAGAAGCU - 21
Stem-loop(if miRNA)	--     C  --UA      AAU  G   UUUCU CA    AGUUAA   GA U   ||||| ||    ||||||   ||   GAAGA GU    UCAAUU   CU U UC     U  UUAA      -AC  C
Stem-loop sequence	UUUCUCCAUAAGUUAAAAUGAGUUCUCCAUUAACUAAUUUGUAGAAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763080.1	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   ||||||||||||||||*|||| targets:3632   AGCUUCUACAAAUUAGCUAAU   3652 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   ||||||||||||||||*|||| targets:3737   AGCUUCUACAAAUUAGCUAAU   3757 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   ||||||||||||||||*|||| targets:3868   AGCUUCUACAAAUUAGCUAAU   3888 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   ||||||||||||||||*|||| targets:3880   AGCUUCUACAAAUUAGCUAAU   3900 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   ||||||||||||||||*|||| targets:3969   AGCUUCUACAAAUUAGCUAAU   3989 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_006603606.2	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   ||=|||||||||||||*|||| targets:1529   AGUUUCUACAAAUUAGCUAAU   1549 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   ||=|||||||||||||*|||| targets:1539   AGUUUCUACAAAUUAGCUAAU   1559 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_014773594.1	ncRNA:21   UCGAAGAUGUUUAAUCAAUUA   1   |*=||||||||||||*||||| targets:174   AAUUUCUACAAAUUAAUUAAU   194 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798052 (LOC106798052), mRNA	uncharacterized LOC106798052(LOC106798052)	coding protein	psRNATarget