Search result

BaseInfo

ncRNA ID novel_gma_miR857
Species Glycine max
Class miRNA
Genome position Chr10:22800135-22800198 [-]
Reference genome Glycine_max_v2.0
Source SRR1451635;SRR1451664;SRR3160566
Length 24
Mature sequence(if miRNA) 1 - AAAAGCUUACGGAUCAAGUUGAUC - 24
Stem-loop(if miRNA) --                 A     -     A
  UCAACUUGAUCCGUAAG UUUUC GGAUC U
  ||||||||||||||||| ||||| ||||| G
  AGUUGAACUAGGCAUUC AAAAG CCUAG U
CU                 G     A     U
Stem-loop sequence UCAACUUGAUCCGUAAGAUUUUCGGAUCAUGUUGAUCCAGAAAAGCUUACGGAUCAAGUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:24   CUAGUUGAACUAGGCAUUCGAAAA   1
  ||||||||||||||||||||||*|
targets:1256   GAUCAACUUGAUCCGUAAGCUUAU   1279

1.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget