Search result

BaseInfo

ncRNA ID novel_gma_miR855
Species Glycine max
Class miRNA
Genome position Chr2:12797109-12797167 [-]
Reference genome Glycine_max_v2.0
Source SRR1451635
Length 24
Mature sequence(if miRNA) 36 - GGUUCUUUCGUAUGUUCUUAUGGA - 59
Stem-loop(if miRNA) --              U   UA      A
  GGUUCUUUCGUAUG UCU  UGGAAG A
  |||||||||||||| |||  |||||| A
  CCAAGAAGGCAUAC AGA  ACCUUC U
UU              U   CA      U
Stem-loop sequence GGUUCUUUCGUAUGUUCUUAUGGAAGAAAUUCUUCCAACAGAUCAUACGGAAGAACCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537143.3
ncRNA:24   AGGUAUUCUUGUAUGCUUUCUUGG   1
  |=||*|||*|*|||||||||||||
targets:107   UUCAAAAGCAAAUACGAAAGAACC   130

2.0 PREDICTED: Glycine max transcription factor bHLH130-like (LOC100810203), mRNA transcription factor bHLH130-like(LOC100810203) coding protein psRNATarget