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BaseInfo

ncRNA ID novel_gma_miR854
Species Glycine max
Class miRNA
Genome position Chr2:24754275-24754401 [-]
Reference genome Glycine_max_v2.0
Source SRR1451635;SRR1451640;SRR1451653
Length 21
Mature sequence(if miRNA) 1 - UUUUGUUAAUAGUCAACGACC - 21
Stem-loop(if miRNA) --A A                  CA          C  A   C   C     ----AA    ACG
   C UUGACUGUUAACAAAAAA  UUGACUGUCA AU UUA UAU UAAUU      UGAC   U
   | ||||||||||||||||||  |||||||||| || ||| ||| |||||      ||||   G
   G AACUGAUAAUUGUUUUUU  AACUGACAGU UA AGU AUA AUUAA      ACUG   A
CCA C                  AC          A  C   A   C     CCAACA    AAC
Stem-loop sequence ACAUUGACUGUUAACAAAAAACAUUGACUGUCACAUAUUACUAUCUAAUUAAUGACACGUGACAAGUCAACAACCAAUUACAUAAUGACAUAUGACAGUCAACAUUUUUUGUUAAUAGUCAACGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771056.1
ncRNA:21   CCAGCAACUGAUAAUUGUUUU   1
  ***|*|||||||||||||||=
targets:304   ACCCUUUGACUAUUAACAAAG   324

3.0 PREDICTED: Glycine max F-box only protein 6-like (LOC100810179), transcript variant X3, mRNA F-box only protein 6-like(LOC100810179) coding protein psRNATarget