ncRNA ID | novel_gma_miR854 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:24754275-24754401 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451635;SRR1451640;SRR1451653 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUGUUAAUAGUCAACGACC - 21 |
Stem-loop(if miRNA) |
--A A                  CA          C  A   C   C     ----AA    ACG    C UUGACUGUUAACAAAAAA  UUGACUGUCA AU UUA UAU UAAUU      UGAC   U    | ||||||||||||||||||  |||||||||| || ||| ||| |||||      ||||   G    G AACUGAUAAUUGUUUUUU  AACUGACAGU UA AGU AUA AUUAA      ACUG   A CCA C                  AC          A  C   A   C     CCAACA    AAC |
Stem-loop sequence | ACAUUGACUGUUAACAAAAAACAUUGACUGUCACAUAUUACUAUCUAAUUAAUGACACGUGACAAGUCAACAACCAAUUACAUAAUGACAUAUGACAGUCAACAUUUUUUGUUAAUAGUCAACGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771056.1 |
|
3.0 | PREDICTED: Glycine max F-box only protein 6-like (LOC100810179), transcript variant X3, mRNA | F-box only protein 6-like(LOC100810179) | coding protein | psRNATarget |