Search result

BaseInfo

ncRNA ID novel_gma_miR833
Species Glycine max
Class miRNA
Genome position Chr17:15400260-15400355 [-]
Reference genome Glycine_max_v2.0
Source SRR1451635;SRR1451640;SRR1451646;SRR1451612;SRR1451613;SRR1451615;SRR1451619;SRR1451620;SRR1451622;SRR1451623
Length 21
Mature sequence(if miRNA) 1 - CCAUUGGUGUAAAUCUUCCUG - 21
Stem-loop(if miRNA) --A                      U         C       U G G
   GAAGAUUUACACCAAUGGGUCA GAGCAACCA AUAAGUG G U U
   |||||||||||||||||||||| ||||||||| ||||||| | |
   CUUCUAAAUGUGGUUACCCGGU CUCGUUGGU UAUUCAC U A C
GUC                      C         A       U G A
Stem-loop sequence AGAAGAUUUACACCAAUGGGUCAUGAGCAACCACAUAAGUGUGGUGUCAAGUUCACUUAUAUGGUUGCUCCUGGCCCAUUGGUGUAAAUCUUCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552002.3
ncRNA:21   GUCCUUCUAAAUGUGGUUACC   1
  *||*|||||||||||||||*|
targets:2105   AAGCAAGAUUUACACCAAUUG   2125

2.5 PREDICTED: Glycine max probable acyl-activating enzyme 17, peroxisomal (LOC100795985), mRNA probable acyl-activating enzyme 17, peroxisomal(LOC100795985) coding protein psRNATarget