ncRNA ID | novel_gma_miR833 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:15400260-15400355 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451635;SRR1451640;SRR1451646;SRR1451612;SRR1451613;SRR1451615;SRR1451619;SRR1451620;SRR1451622;SRR1451623 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CCAUUGGUGUAAAUCUUCCUG - 21 |
Stem-loop(if miRNA) |
--A                      U         C       U G G    GAAGAUUUACACCAAUGGGUCA GAGCAACCA AUAAGUG G U U    |||||||||||||||||||||| ||||||||| ||||||| | |    CUUCUAAAUGUGGUUACCCGGU CUCGUUGGU UAUUCAC U A C GUC                      C         A       U G A |
Stem-loop sequence | AGAAGAUUUACACCAAUGGGUCAUGAGCAACCACAUAAGUGUGGUGUCAAGUUCACUUAUAUGGUUGCUCCUGGCCCAUUGGUGUAAAUCUUCCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003552002.3 |
|
2.5 | PREDICTED: Glycine max probable acyl-activating enzyme 17, peroxisomal (LOC100795985), mRNA | probable acyl-activating enzyme 17, peroxisomal(LOC100795985) | coding protein | psRNATarget |