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BaseInfo

ncRNA ID novel_gma_miR832
Species Glycine max
Class miRNA
Genome position Chr17:24067819-24067933 [-]
Reference genome Glycine_max_v2.0
Source SRR1451635
Length 21
Mature sequence(if miRNA) 95 - CCGGAAGAAGAAGGUGGGCUU - 115
Stem-loop(if miRNA) --                 G              ----    U    C    C     G
  CCGGAAGAAGAAGGUGG CUUCCGGAAGAACU    UCCG AAUA GUUC GGAAG A
  ||||||||||||||||| ||||||||||||||    |||| |||| |||| ||||| C
  GGCCUUCUUCUUCCACC GAAGGCCUUCUUGG    AGGC UUAU CGAG CCUUC G
AA                 A              AAGA    C    U    A     U
Stem-loop sequence CCGGAAGAAGAAGGUGGGCUUCCGGAAGAACUUCCGUAAUACGUUCCGGAAGGACGUCUUCCAGAGCUUAUUCCGGAAGAAGGUUCUUCCGGAAGACCACCUUCUUCUUCCGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538993.3
ncRNA:21   UUCGGGUGGAAGAAGAAGGCC   1
  ***||||||||||||||||*|
targets:230   UCUCCCACCUUCUUCUUCCCG   250

2.5 PREDICTED: Glycine max probable transcription factor PosF21 (LOC100814674), mRNA probable transcription factor PosF21(LOC100814674) coding protein psRNATarget
XM_003547589.3
ncRNA:21   UUCGGGUGGAAGAAGAAGGCC   1
  *|*=||||||||||||||||*
targets:420   CACUCCACCUUCUUCUUCCGA   440

3.0 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g17630 (LOC100815287), mRNA putative pentatricopeptide repeat-containing protein At1g17630(LOC100815287) coding protein psRNATarget