ncRNA ID | bra-miR390-3p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA4:16514660-16514764 [+] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 68 - CGCUGUCCAUCCUGAGUUUCA - 88 |
Stem-loop(if miRNA) |
    --      AU U  A          G           UCAUG   ACA GUAG  AGAAGA  C GU AAGCUCAGGA GGAUAGCGCCA     AUC   C ||||  ||||||  | || |||||||||| |||||||||||     |||   A CAUC  UCUUCU  G UA UUUGAGUCCU CCUGUCGCGGU     UAG   C     AU      CG U  C          A           UUUUA   CUA |
Stem-loop sequence | GUAGAGAAGAAUCUGUAAAGCUCAGGAGGGAUAGCGCCAUCAUGAUCACACACAUCGAUAUUUUUGGCGCUGUCCAUCCUGAGUUUCAUUGGCUCUUCUUACUAC |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |