Search result

BaseInfo

ncRNA ID	novel_gma_miR823
Species	Glycine max
Class	miRNA
Genome position	Chr16:37407956-37408055 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451635
Length	24
Mature sequence(if miRNA)	1 - UCUUCACAAGAAAUCAUAGUGACC - 24
Stem-loop(if miRNA)	-- UG    --   G   G       AU GAAG    UCAAAG     U  U   U  CUGU  UUU UUG UGAAGAA  C    AUAU      GCACA CA A   |  ||||  ||| ||| |||||||  |    ||||      ||||| || G   A  GAUA  AAA AAC ACUUCUU  G    UAUA      UGUGU GU U CC GU    CU   G   -       CU -AUA    UAUAUA     -  U
Stem-loop sequence	UUGCUGUUUUGUUGGUGAAGAAAUCGAAGAUAUUCAAAGGCACAUCAUAGUUUGUGUGUAUAUAUAUAUAUAGUCUUCUUCACAAGAAAUCAUAGUGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT092309.1	ncRNA:24   CCAGUGAUACUAAAGAACACUUCU   1   *|*==|||*|=||||||||||||| targets:412   UGAUGCUAGGGUUUCUUGUGAAGA   435 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-10J13 unknown mRNA	NA	coding protein	psRNATarget
NM_001249524.1	ncRNA:24   CCAGUGAUACUAAAGAACACUUCU   1   *|*==|||*|=||||||||||||| targets:412   UGAUGCUAGGGUUUCUUGUGAAGA   435 Target Full Sequence	2.0	Glycine max uncharacterized LOC100527466 (LOC100527466), mRNA	uncharacterized LOC100527466(LOC100527466)	coding protein	psRNATarget
XM_003551549.3	ncRNA:24   CCAGUGAUACUAAAGAACACUUCU   1   *|*==|||*|=||||||||||||| targets:458   UGAUGCUAGGGUUUCUUGUGAAGA   481 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor SCREAM2-like (LOC100782382), mRNA	transcription factor SCREAM2-like(LOC100782382)	coding protein	psRNATarget