ncRNA ID | novel_gma_miR820 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:5519738-5519885 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451635;SRR1451645;SRR2045236;SRR2045238;SRR2045239;SRR3160566;SRR1295522;SRR1292924 |
Length | 24 |
Mature sequence(if miRNA) | 125 - UAAGACGAUCGUGAUGUCAGCACC - 148 |
Stem-loop(if miRNA) |
--              C           GU  U                        ACAA      A   AGC   UGCUGACAUCACGA CGUCUUAGAAA  CA GCUUCAAAGAUGGUGCUGACGUCG    CGUCUU GAA   C   |||||||||||||| |||||||||||  || ||||||||||||||||||||||||    |||||| |||   ACGACUGUAGUGCU GCAGAAUCUUU  GU CGAAGUUUCUGCCACGACUGUAGU    GCAGAA CUU   A CC              A           UG  C                        GCUG      A   CCA |
Stem-loop sequence | UGCUGACAUCACGACCGUCUUAGAAAGUCAUGCUUCAAAGAUGGUGCUGACGUCGACAACGUCUUAGAAAGCCAACCUUCAAAGACGGUCGUGAUGUCAGCACCGUCUUUGAAGCCUGGUUUUCUAAGACGAUCGUGAUGUCAGCACC |