Search result

BaseInfo

ncRNA ID novel_gma_miR820
Species Glycine max
Class miRNA
Genome position Chr1:5519738-5519885 [+]
Reference genome Glycine_max_v2.0
Source SRR1451635;SRR1451645;SRR2045236;SRR2045238;SRR2045239;SRR3160566;SRR1295522;SRR1292924
Length 24
Mature sequence(if miRNA) 125 - UAAGACGAUCGUGAUGUCAGCACC - 148
Stem-loop(if miRNA) --              C           GU  U                        ACAA      A   AGC
  UGCUGACAUCACGA CGUCUUAGAAA  CA GCUUCAAAGAUGGUGCUGACGUCG    CGUCUU GAA   C
  |||||||||||||| |||||||||||  || ||||||||||||||||||||||||    |||||| |||
  ACGACUGUAGUGCU GCAGAAUCUUU  GU CGAAGUUUCUGCCACGACUGUAGU    GCAGAA CUU   A
CC              A           UG  C                        GCUG      A   CCA
Stem-loop sequence UGCUGACAUCACGACCGUCUUAGAAAGUCAUGCUUCAAAGAUGGUGCUGACGUCGACAACGUCUUAGAAAGCCAACCUUCAAAGACGGUCGUGAUGUCAGCACCGUCUUUGAAGCCUGGUUUUCUAAGACGAUCGUGAUGUCAGCACC